DRSC/TRiP Functional Genomics Resources

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Protein Alignment Np and F11

DIOPT Version :10

Sequence 1:NP_610437.2 Gene:Np / 35904 FlyBaseID:FBgn0265011 Length:1041 Species:Drosophila melanogaster
Sequence 2:NP_001398595.1 Gene:F11 / 290757 RGDID:1309364 Length:622 Species:Rattus norvegicus


Alignment Length:388 Identity:114/388 - (29%)
Similarity:171/388 - (44%) Gaps:84/388 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   704 IVKTTEAPASSIELASSTSSYTDLGSDLAASSSSSTTTTTSSPT----TAAETTDYSGEEPNTTT 764
            ::||:|:...|..:..|.          |.|..|......|.|.    .....||:.|||.:...
  Rat   256 LLKTSESGFPSTRITKSN----------ALSGFSLQHCRHSIPVFCHPNFYNDTDFLGEELDIVD 310

  Fly   765 I-----------------------------EATG------STTVAPANALEG-----------VD 783
            :                             |..|      |:..:|...|.|           ..
  Rat   311 VKGKESCQKMCSDNVRCQFFTYYPSRGSCSERKGRCYLKLSSNGSPTRILHGRGGISGYTLRLCK 375

  Fly   784 YKEVCGRRMFPEPRIVGGANAAFGRWPWQISLRQWRTSTYLHKCGAALLNENWAITAAHCVDNV- 847
            ...||..::  .||:.|||.:..|.||||::|.    :|..|.||.:::...|.:|||||.... 
  Rat   376 MDNVCTTKI--RPRVFGGAASVHGEWPWQVTLH----TTQGHLCGGSIIGNRWILTAAHCFSGTE 434

  Fly   848 PPSDLLLRLGEYDLAEEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVI----FQPNI 908
            .|..|.:..|..:.:|..|...:  .|||.:..|.|:......:|:|||:. ||.:    ||.  
  Rat   435 TPKTLRVYGGIVNQSEINEDTTF--FRVQEMIIHDQYTSAESGFDIALLKL-EPAMNYTDFQR-- 494

  Fly   909 IPVCVPD-NDENFIGQTAFVTGWGRLYEDGPLPSVLQEVAVPVINNTICESMYRSAGYIEHIPHI 972
             |:|:|. .|.|.:....:|||||.......:.|.||:..||:::|..|::.||.    ..|.:.
  Rat   495 -PICLPSKGDRNVVHTECWVTGWGYTKSRDEVQSTLQKAKVPLVSNEECQTRYRK----HKITNK 554

  Fly   973 FICAGWKKGGYDSCEGDSGGPMVLQRESDKRFHLGGVISWGIGCAEANQPGVYTRISEFRDWI 1035
            .||||:|:||.|:|:||||||  |..:.:..:||.|:.|||.||.:..:|||||.::::.|||
  Rat   555 VICAGYKEGGKDTCKGDSGGP--LSCKHNGVWHLVGITSWGEGCGQKERPGVYTNVAKYVDWI 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NpNP_610437.2 Tryp_SPc 798..1038 CDD:238113 89/244 (36%)
F11NP_001398595.1 APPLE 20..103 CDD:128519
APPLE 110..193 CDD:128519
APPLE 200..283 CDD:128519 8/36 (22%)
APPLE 291..374 CDD:128519 11/82 (13%)
Tryp_SPc 388..615 CDD:238113 87/242 (36%)
Blue background indicates that the domain is not in the aligned region.

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