DRSC/TRiP Functional Genomics Resources

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Protein Alignment Np and Cfi

DIOPT Version :10

Sequence 1:NP_610437.2 Gene:Np / 35904 FlyBaseID:FBgn0265011 Length:1041 Species:Drosophila melanogaster
Sequence 2:NP_001396602.1 Gene:Cfi / 12630 MGIID:105937 Length:615 Species:Mus musculus


Alignment Length:258 Identity:80/258 - (31%)
Similarity:125/258 - (48%) Gaps:45/258 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   797 RIVGGANAAFGRWPWQISLRQWRTSTYLHKCGAALLNENWAITAAHCVDNVPPSDLLLRLGEY-- 859
            |::||..|..|.:|||::::..:..|    ||...:...|.:|||||   |.||    |...|  
Mouse   372 RVIGGKPANVGDYPWQVAIKDGQRIT----CGGIYIGGCWILTAAHC---VRPS----RAHSYQV 425

  Fly   860 -----DLAEEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFY----EPVIFQPNIIPVCVP- 914
                 |..:.....|.|  .|:.|..|.:::..||:.|:||:...    :.....||.:|.||| 
Mouse   426 WTALLDWLKPNSQLGIQ--TVKRVIVHEKYNGATFQNDIALIEMKMHTGKKECELPNSVPACVPW 488

  Fly   915 ------DNDENFIGQTAFVTGWGRLYEDGPLPSVLQEVAVPVINNTICESMYRSAGYIEHIPHIF 973
                  .||.      ..::||||..::..:.| |:...|.:|.|  |...|....|.:.:.   
Mouse   489 SPYLFQPNDR------CIISGWGRGKDNQKVYS-LRWGEVDLIGN--CSQFYPDRYYEKEMQ--- 541

  Fly   974 ICAGWKKGGYDSCEGDSGGPMVLQRESDKRFHLGGVISWGIGCAEANQPGVYTRISEFRDWIN 1036
             |||.:.|..|:|:||||||:|.: :.:...::.|::|||..|.:...||||||::.:.|||:
Mouse   542 -CAGTRDGSIDACKGDSGGPLVCE-DINNVTYVWGIVSWGENCGKPEFPGVYTRVANYFDWIS 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NpNP_610437.2 Tryp_SPc 798..1038 CDD:238113 79/257 (31%)
CfiNP_001396602.1 FIMAC 46..111 CDD:214493
SR 117..220 CDD:214555
LDLa 232..261 CDD:238060
Ldl_recept_a 264..298 CDD:395011
Tryp_SPc 372..601 CDD:214473 78/255 (31%)
Blue background indicates that the domain is not in the aligned region.

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