DRSC/TRiP Functional Genomics Resources

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Protein Alignment Np and St14

DIOPT Version :10

Sequence 1:NP_610437.2 Gene:Np / 35904 FlyBaseID:FBgn0265011 Length:1041 Species:Drosophila melanogaster
Sequence 2:NP_446087.1 Gene:St14 / 114093 RGDID:69288 Length:855 Species:Rattus norvegicus


Alignment Length:322 Identity:112/322 - (34%)
Similarity:163/322 - (50%) Gaps:35/322 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   728 GSDLAASSSSSTTTTTSSPTTAAETTDYSGEEPNTTTIEATGSTTVAPANALEGVDYKEV-CGRR 791
            |||.|:..:          ..|...|.|:....|...:...........:..:|.|.|.. ||.|
  Rat   553 GSDEASCDN----------VNAVSCTKYTYRCQNGLCLNKGNPECDGKKDCSDGSDEKNCDCGLR 607

  Fly   792 MF-PEPRIVGGANAAFGRWPWQISLRQWRTSTYLHKCGAALLNENWAITAAHCVDNVPPSDLLLR 855
            .| .:.|:|||.||..|.||||:||......   |.|||:|::.:|.::||||..:    :.:.:
  Rat   608 SFTKQARVVGGTNADEGEWPWQVSLHALGQG---HLCGASLISPDWLVSAAHCFQD----ETIFK 665

  Fly   856 LGEYDL---------AEEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVIFQPNIIPV 911
            ..::.:         ..:....|.||.:::.:.:||.|:..||:||:|||...:|..:...:.|:
  Rat   666 YSDHTMWTAFLGLLDQSKRSASGVQEHKLKRIITHPSFNDFTFDYDIALLELEKPAEYSTVVRPI 730

  Fly   912 CVPDNDENF-IGQTAFVTGWGRLYEDGPLPSVLQEVAVPVINNTICESMYRSAGYIEHIPHIFIC 975
            |:|||...| .|:..:|||||...|.|....:||:..:.|||.|.||.:..     :.|....:|
  Rat   731 CLPDNTHVFPAGKAIWVTGWGHTKEGGTGALILQKGEIRVINQTTCEELLP-----QQITPRMMC 790

  Fly   976 AGWKKGGYDSCEGDSGGPMVLQRESDKRFHLGGVISWGIGCAEANQPGVYTRISEFRDWINQ 1037
            .|:..||.|||:||||||: ...|.|.|....||:|||.|||:.|:|||||||.|.||||.:
  Rat   791 VGFLSGGVDSCQGDSGGPL-SSVEKDGRIFQAGVVSWGEGCAQRNKPGVYTRIPEVRDWIKE 851

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NpNP_610437.2 Tryp_SPc 798..1038 CDD:238113 96/250 (38%)
St14NP_446087.1 SEA 88..178 CDD:460188
CUB 214..332 CDD:238001
CUB 340..444 CDD:238001
LDLa 454..486 CDD:238060
LDLa 492..523 CDD:238060
LDLa 525..559 CDD:238060 4/5 (80%)
LDLa 567..602 CDD:238060 6/34 (18%)
Tryp_SPc 615..852 CDD:238113 96/250 (38%)
Blue background indicates that the domain is not in the aligned region.

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