DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Np and hpn

DIOPT Version :9

Sequence 1:NP_001246213.1 Gene:Np / 35904 FlyBaseID:FBgn0265011 Length:1041 Species:Drosophila melanogaster
Sequence 2:XP_012811934.1 Gene:hpn / 100145343 XenbaseID:XB-GENE-995348 Length:417 Species:Xenopus tropicalis


Alignment Length:362 Identity:114/362 - (31%)
Similarity:163/362 - (45%) Gaps:83/362 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   731 LAASSSSSTTTTTSSPTTAAETTDYSGEEPNTTTIEATGST--------------------TV-- 773
            |..||.|:....|.|..........|.:|....|....|::                    ||  
 Frog    75 LVCSSFSNPEVATLSCEEMGFIRSVSHQELRVETAGTNGTSGYYCVHESQINSAKRLLDILTVCE 139

  Fly   774 APANALEGVDYKEVCGRRMFPEPRIVGGANAAFGRWPWQISLRQWRTSTY--LHKCGAALLNENW 836
            .|:.....|..:: ||||.....|||||.:|..||||||:|||      |  .|.||.:|::..|
 Frog   140 CPSGRFLSVQCQD-CGRRKLAVDRIVGGQDATLGRWPWQVSLR------YDGAHLCGGSLISSEW 197

  Fly   837 AITAAHC-----------------VDNVPPSDLLLRLGEYDLAEEEEPYGYQERRVQIVASH--- 881
            .:|||||                 |..:.|...||                   .|:.:..|   
 Frog   198 VLTAAHCFPERNRIVSQWRVFAGAVSQLSPRGKLL-------------------GVKGIIYHSGY 243

  Fly   882 -PQFDPRTFE--YDLALLRFYEPVIFQPNIIPVCVPDNDENFI-GQTAFVTGWGRLYEDGPLPSV 942
             |..:|.:.|  .|:||:....||.....|.|||:|...:..| |:...|:|||.|...|....:
 Frog   244 LPFLNPDSEENSNDIALVHLASPVTLSEYIQPVCLPALGQQIIDGKICTVSGWGNLQYYGQQSEI 308

  Fly   943 LQEVAVPVINNTICESMYRSAGYIEHIPHIFICAGWKKGGYDSCEGDSGGPMV----LQRESDKR 1003
            |||.:||:|::::|.   :...|:..|.....|||:.:||.|:|:||||||.|    |.|.|  |
 Frog   309 LQEASVPIISSSVCN---QPEYYMNQITGKMFCAGYAEGGIDACQGDSGGPFVCEDTLSRSS--R 368

  Fly  1004 FHLGGVISWGIGCAEANQPGVYTRISEFRDWINQILQ 1040
            :.|.|::|||||||..|:||||.::.:::.||.:.::
 Frog   369 WRLCGIVSWGIGCAMPNKPGVYAKVDQYQYWIYRAMK 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NpNP_001246213.1 Tryp_SPc 797..1035 CDD:214473 94/267 (35%)
Tryp_SPc 798..1038 CDD:238113 95/269 (35%)
hpnXP_012811934.1 Hepsin-SRCR 50..159 CDD:370400 18/84 (21%)
Tryp_SPc 163..400 CDD:238113 93/266 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X11
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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