DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment flz and st14a

DIOPT Version :9

Sequence 1:NP_001137622.1 Gene:flz / 35902 FlyBaseID:FBgn0286782 Length:1693 Species:Drosophila melanogaster
Sequence 2:NP_001035441.2 Gene:st14a / 678603 ZFINID:ZDB-GENE-030131-6496 Length:834 Species:Danio rerio


Alignment Length:845 Identity:204/845 - (24%)
Similarity:328/845 - (38%) Gaps:208/845 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   952 YDQPSAPSAS--YDQLAPMPSLNYNEQHASSPGRKPSTAKPISTSYVTGPSTPRPPATVDYHYDN 1014
            |:.|.:|...  .|:::....|.|:|            :..:|..|||.........:|..:|::
Zfish    94 YENPQSPEFQNLADKVSTQLKLMYSE------------SSQLSKYYVTSRVQAFSEGSVIAYYES 146

  Fly  1015 ---VPPLFMADDKLDAFIQSTAENI-------VGSTPGN-YQPPLVATASTPAYAHRPTSSGSYG 1068
               ||....|  .:|..:.:.:|..       |....|: ....:|::|.......:..||..|.
Zfish   147 EFAVPAAHEA--AVDQAVSNLSEKYSSGKARKVSEQQGSLVLDSVVSSALDKRLISKARSSTRYN 209

  Fly  1069 HKKPGFVQ----INGTPKPPRPTVL-----ITPKPTAINLVTYSSLSDDSNKLASSTSSYVTGRP 1124
            .....||:    ..|.|..|.|:..     :...|..:..:|:.:.:.:.|              
Zfish   210 KHTSRFVEDIIFSPGFPDSPYPSNTFVQWQLRGDPDHVLKLTFDTFNLEQN-------------- 260

  Fly  1125 GVQGVSSNDF----------------KDPGYFG-SSPVHVAFTQSTTEAVYAVPSDDKPAFPGYF 1172
                 .||||                :..||:. |.|  ::|..|....:..:.::::.|:||:.
Zfish   261 -----CSNDFLRVYDSLVALDKFIMAEKCGYYSPSDP--LSFISSRNVMLVTLVTNEEGAYPGFR 318

  Fly  1173 GPTPSYPAFSVPGEKVGQNVMEETYTSPNDFVNFPPVRNPNLNMSAASSAVTSDLDLSTPA--FV 1235
            .......|.:..|..:|.:.:   :|||    |||....||         :|....:..||  |:
Zfish   319 ARVSQIQAVTCGGRMIGNSGI---FTSP----NFPDYYPPN---------ITCQWYIEVPAGKFI 367

  Fly  1236 EDVVLKDKMHTLVHKLVASLQGNFEALADMIEEPGSNK-------TVATYQAGAGGTAKPVRVVT 1293
            :   ||      ..|::.|.  ..|...|.:|..|.:|       |:.|..:...    .||.|:
Zfish   368 K---LK------FPKIMVST--GSECHGDFVEVVGQSKLCGQQLNTIVTVNSNTA----TVRFVS 417

  Fly  1294 TRKPV-RTATTTRPKVTTKKPVTRVTTKAPNKKTSAVSTTTRKPATR--------------RTTV 1343
            ....| |..:.|....:...|...:.. ..||:..       ||:.|              ....
Zfish   418 DSSNVDRGFSATFEDYSPSDPCQDLFL-CNNKRCV-------KPSMRCDGWNDCGDTSDEQNCQC 474

  Fly  1344 AAKVTTTTRRPATKKPTRRVSSTV-----KTTTVSSARPAD------DEIVDEEDEEDVNPNPSD 1397
            .||:...  :....||.......|     .|..::....||      |:.:.|:.:.|...:.:|
Zfish   475 DAKMIQC--KNGLCKPMFWRCDGVDDCGDSTDELNCGCRADQFKCKNDKCISEKQKCDGKDDCND 537

  Fly  1398 NEIDQGAT------LSSYGGANGRKIHSTSRTLPTPNL--------AFHSPSTECGVRPHVKSGR 1448
            ...::|..      :|::...|.:.|     |.|.|..        .....:..||.:.:.|| |
Zfish   538 GSDEEGCARTDSCLVSTFLCGNSKCI-----TKPNPECDGQDDCGDNSDESNCNCGTKAYKKS-R 596

  Fly  1449 IVGGKGSTFGAYPWQVLVRESTWLGLFTKN---KCGGVLITSRYVITAAHC----------QPGF 1500
            ||||:.:..|.:||||        .|..||   .|||.:|..|:::|||||          |||.
Zfish   597 IVGGQDAFEGEFPWQV--------SLHIKNIAHVCGGSIINERWIVTAAHCVQDDVKIKYSQPGT 653

  Fly  1501 LASLVAVMGEFDISGDLESKRSVTKN-VKRVIVHRQYDPATFENDLALLELDSPVQFDTHIVPIC 1564
            ....:.:..:.|       |.:.||. :|:||.|..|:..|::||:||:|::|||.|...|.|:|
Zfish   654 WEVFLGLHSQKD-------KLTATKRLLKQVIPHPYYNAYTYDNDIALMEMESPVTFSDTIRPVC 711

  Fly  1565 MPNDVADF-TGRMATVTGWGRLKYGGGVPSVLQEVQVPIIENSVCQEMFHTAGHNKKILTSFLCA 1628
            :|.....| .|....::|||..:.||...:|||:.:|.||.::||.::.     ..:|.:...||
Zfish   712 LPTATDTFPAGTSVFISGWGATREGGSGATVLQKAEVRIINSTVCNQLM-----GGQITSRMTCA 771

  Fly  1629 GYANGQKDSCEGDSGGPLVLQRPDG-RYELAGTVSHGIKCAAPYLPGVYMRTTFYKPWLRSITGV 1692
            |..:|..|:|:|||||||..  |.| |..|||.||.|..||....||:|.....::.|::..|||
Zfish   772 GVLSGGVDACQGDSGGPLSF--PSGKRMFLAGVVSWGDGCARRNKPGIYSNVPKFRAWIKEKTGV 834

  Fly  1693  1692
            Zfish   835  834

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
flzNP_001137622.1 PRK14948 <272..452 CDD:237862
PRK11633 <365..>439 CDD:236940
PRK10263 <547..>1005 CDD:236669 11/54 (20%)
PHA03247 <792..1096 CDD:223021 32/165 (19%)
Tryp_SPc 1449..1689 CDD:238113 92/255 (36%)
st14aNP_001035441.2 SEA 77..168 CDD:279699 17/87 (20%)
CUB 219..322 CDD:238001 20/123 (16%)
CUB 329..431 CDD:238001 31/132 (23%)
LDLa 443..472 CDD:238060 5/36 (14%)
LDLa 474..508 CDD:238060 6/35 (17%)
LDLa 510..544 CDD:238060 6/33 (18%)
LDLa 550..585 CDD:238060 6/39 (15%)
Tryp_SPc 596..828 CDD:214473 92/253 (36%)
Tryp_SPc 597..831 CDD:238113 92/255 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 188 1.000 Domainoid score I3236
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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