DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment flz and cfd

DIOPT Version :10

Sequence 1:NP_001137622.1 Gene:flz / 35902 FlyBaseID:FBgn0286782 Length:1693 Species:Drosophila melanogaster
Sequence 2:NP_001018368.1 Gene:cfd / 553553 ZFINID:ZDB-GENE-050522-411 Length:249 Species:Danio rerio


Alignment Length:265 Identity:83/265 - (31%)
Similarity:134/265 - (50%) Gaps:35/265 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly  1430 AFHSPSTECGVRPHVKSGRIVGGKGSTFGAYPWQVLVRESTWLGLFTKNKCGGVLITSRYVITAA 1494
            |||  :.:|          |.||:.:...:.|:...|:   |.|   |::|||.||:|::|::||
Zfish    14 AFH--TGDC----------ITGGQEAKAHSRPYMASVQ---WNG---KHECGGFLISSQWVMSAA 60

  Fly  1495 HC-QPGFLASLVAVMGEFDISGDLESKRSVTKNVKRVIVHRQYDPATFENDLALLELDSPVQFDT 1558
            || |.|..:.:..|:|...:||..::|::....|..   |..:..:.::||:||::||.||....
Zfish    61 HCFQDGRTSGVKVVLGAHSLSGAEDTKQTFDAEVYN---HPDFSISNYDNDIALIKLDKPVTQSD 122

  Fly  1559 HIVPICMPNDVADFTGRMATV--TGWGRLKYGGGVPSVLQEVQVPIIENSVCQEMFHTAGHNKKI 1621
            .:.|:....|........|.|  .|||.|...||.|..|.|:.:|::|...|.   ....:.:|.
Zfish   123 AVKPVKFQRDETADPKEAAVVETAGWGSLNNMGGRPDKLHELSIPVMERWRCG---RADFYGEKF 184

  Fly  1622 LTSFLCAGYANGQKDSCEGDSGGPLVLQRPDGRYELAGTVSH-GIKCAAPYLPGVYMRTTFYKPW 1685
            .::.|||  |:.:||:|:|||||||:.     |..:.|..|: |.||.:...||:|...:.|..|
Zfish   185 TSNMLCA--ADKRKDTCDGDSGGPLLY-----RGIVVGITSNGGKKCGSSRKPGLYTIISHYASW 242

  Fly  1686 LRSIT 1690
            :.:.|
Zfish   243 IDTTT 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
flzNP_001137622.1 PRK11633 <365..>439 CDD:236940
PRK10263 <547..>1005 CDD:236669
PHA03247 <792..1096 CDD:223021
Tryp_SPc 1449..1689 CDD:238113 78/243 (32%)
cfdNP_001018368.1 Tryp_SPc 21..246 CDD:238113 78/243 (32%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.