DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment flz and Corin

DIOPT Version :9

Sequence 1:NP_001137622.1 Gene:flz / 35902 FlyBaseID:FBgn0286782 Length:1693 Species:Drosophila melanogaster
Sequence 2:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster


Alignment Length:1777 Identity:362/1777 - (20%)
Similarity:564/1777 - (31%) Gaps:697/1777 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 QQHQQQTKLQQSAAQSSFESYGEQQQSLSEEQVAQQPSQNIYDQQNLDKVYQQLDSSSSISPPNG 225
            |.||.||                        .||.|.|::            :.:.:||::.|..
  Fly    15 QDHQHQT------------------------SVADQRSRS------------RSERASSLALPLN 43

  Fly   226 AYGD--EPQQQEYQSESEQPVRDENAYPTSSSSTEATQSQSSSASV------------EFEQEPS 276
            :..|  :.||::.:|.:..|:      |::|.|...:.|.|||.|:            |.:|:||
  Fly    44 SLLDFYDKQQEQCKSVTLLPL------PSNSGSISESSSLSSSNSIVRRHSSHYYPMLEDKQKPS 102

  Fly   277 QPADASND----QTTQKINKQPVQPPNF-------HVHKHSVTINSPSSPPQNDDFVMQVLSTLP 330
            |...|:.:    .|.||..:...|..:.       |..:|.|.:::|.:||             |
  Fly   103 QLPQAATEMLVNMTEQKYCQSAHQGASIAGGRQVHHQQQHLVRVDTPVTPP-------------P 154

  Fly   331 PEHADDHHIVFTTEVPTKITSGLQDQTSSESNSFEEVSSTPAATQKPKPKPTQMPTQKTTQKATQ 395
            |             :|.::..|                                           
  Fly   155 P-------------IPRRLLRG------------------------------------------- 163

  Fly   396 KPTPKPTQKAKPKPVPQLAESMKRPIQQKPQQVAKPKPSPKPAQSTNNHHHNHLILDGGEFTHSD 460
                                       :...|.:.|.|.|..|              ||:    |
  Fly   164 ---------------------------KSAWQASSPHPLPLSA--------------GGQ----D 183

  Fly   461 ITHPGADADLVEDLQFSTGYGPQPVYAEPPKQQQQQQPAEQSYISSSTS---------------- 509
            ..|             .||.|...||.:|     :...||.....|...                
  Fly   184 GAH-------------GTGTGTVFVYPQP-----ENVTAEAVVRGSGDGQGGGGAGLQSALLVDI 230

  Fly   510 AKRPTTGHNSPTTVSSITTHVDSIESIILQLNNTSHGPSYNVVSQQTPSY---GYPGAAVVQTEP 571
            |.||.:|:.....:|         :...:.|.|:....|......:...|   .|.|.:      
  Fly   231 ATRPASGYADADGIS---------DDDRMSLENSVFDESLTSTPVKVAGYLAGRYAGLS------ 280

  Fly   572 AAQNPTFYQENESEKVQESDSQSDYG------------YTTTVNYESFYDKVSDEQDA--SAAVS 622
                   :....:::...|...|.||            .:|:|::.|.:..| |.|.:  ...:|
  Fly   281 -------HMAKRAQRSSSSTVDSAYGSSLGGHSERFASSSTSVDFRSRFSSV-DTQSSLDEKPLS 337

  Fly   623 QSAEMPTA---RPGYGEDVSAVLEDHTMPANGYHDAEAPVAPQTSEFNKMPVMGIAYPVDMSYME 684
            .|.:.|.|   |..|.|  .|||.|.....|                |....:|:|.        
  Fly   338 SSIDSPLARDPRDAYRE--RAVLNDAMHKLN----------------NNNTSLGLAL-------- 376

  Fly   685 EEGNLPATAAGYGQMSSDSYEASTESTYQKLSTVQTEEPQPTYVRPTTNANKQNRPVASYIGMVT 749
                               |.||..:..   |:|.::..|    .|...|.||..||..      
  Fly   377 -------------------YSASNNNNG---SSVASDGSQ----LPVVPARKQPPPVKG------ 409

  Fly   750 MQHYNPQPGNGDYQAQ---VPPEVSVSSHTTKVQEQMDETSNGYQQSETTSGYVSPPTAVPAPAQ 811
              ..|.....|:.|:|   .|..||.|:.|:..      .|.|  .|..:||.:|..:. |.||.
  Fly   410 --SSNSSNSIGETQSQSSKEPSSVSASASTSSA------ASAG--SSTISSGTMSSMSG-PCPAV 463

  Fly   812 RPQYDAVQGDASSERPVLVTASPRPRPKPSTKRPAVKRPISGESTKKKPQPQPSAGAYNQEKISE 876
            .|..||            :|..|.| |:|..::..|..|:   .|..:..|.|.....|:     
  Fly   464 VPPTDA------------ITKRPGP-PEPPLRQANVFDPV---ETGSRGHPPPPLTVRNK----- 507

  Fly   877 HSTRKPVSNGYDKVPESPITHIQIKKPSATQHKEQEQTGYPRPASPAGYEQTTAAAPAPAAPSLN 941
                    .|.:|.|  |||:.::::   .|........|...:|| ||......||...:.. .
  Fly   508 --------LGRNKPP--PITYPRMQQ---RQDSTLSSDSYSISSSP-GYNSKLMEAPLLGSQQ-G 557

  Fly   942 YDKPDAPPSQYDQPSAPSASYDQLAPMPSLNYNEQHASSPGRKPSTAKPISTSYVTGPSTPRPPA 1006
            ..|.:||.|...|           .|:..|        :|.|....|...:.|...||:.|.|.:
  Fly   558 GRKSNAPGSAQRQ-----------TPLMDL--------APTRFLGGAGGGTGSGKQGPAMPPPRS 603

  Fly  1007 TVDYHYDNVPPLFMADDKLDAFIQSTAENIVGSTPGNYQPPLVATASTPAYAHR----------- 1060
            .:::..|:.       ...|:|.|:       |:|| |.|.|:.....|:.:.:           
  Fly   604 KINFRQDST-------ISSDSFSQT-------SSPG-YNPKLMEAPLLPSLSAKRLCSAPAPIVC 653

  Fly  1061 -------------PTSSGSYGHK---KPGFVQI-----NGTP-------------KPPRPTVL-- 1089
                         |..:.|..||   :|..:|.     ||.|             |...|.:.  
  Fly   654 RQGVQHEPIEELEPPQTISPLHKAAGQPSSLQTIVRFQNGAPHTMSLQHQIINRRKSSNPYITNG 718

  Fly  1090 -ITPKPTAINLVTYSSLSDDSNKLASSTSSYVTGRPGVQGVSSN-----DFKDPGYFGSS----- 1143
             :..:...|.:..::.|:     :|...::|....|.::.|:..     ..:|...||.:     
  Fly   719 RLKFRLFQILINAFALLA-----IAGGLAAYFNAYPTIKFVNKTIINTIHVEDTTSFGKNPAPGT 778

  Fly  1144 --PVHVAFTQSTTEAVYAVPSDDKPAFPGYFGPTPSYPAFSVPGEKVGQNVMEETYTSPNDFVNF 1206
              |:.|.|.|.             |..|..:...|:|         :|.....||.|..:.:...
  Fly   779 CLPIIVRFCQG-------------PQIPYNYTVFPNY---------IGHFGQLETQTDLDSYEAL 821

  Fly  1207 PPVR-------------NPNLNMSAASSAVTSDL---------------DLSTPAFV-------- 1235
            ..||             .|....|.|:......|               .||.|.::        
  Fly   822 VDVRCYELVSLFLCTLFVPKCGQSGATVPPCKTLCTETMRRCGFFFDVFGLSLPEYLNCKLFKDF 886

  Fly  1236 ---EDVV----LKDKMHTLVHKLVASLQ--------------GNFEALADMIEEP---------- 1269
               ||.|    :::.|....|......|              |:.:.: |..:|.          
  Fly   887 PSSEDCVGLDEVREVMRAATHPKCDGFQCDQNRCLPQEYVCDGHLDCM-DQADEAKCERCGPDEI 950

  Fly  1270 --GSNKTVATYQAGAGGTAKP--------VRVVTTRKPVRTATTTRPKVTTK-------KPVTRV 1317
              |.::.:.|.....|....|        :|:......|.|......::..:       |...|.
  Fly   951 YCGDSQCIGTKHICDGIIDCPYGQDERNCLRLSERNGDVGTGVLEVYRIGQRQWMPACVKNWDRA 1015

  Fly  1318 TTKAPNKKTSAVSTTTRKPATRRTTVAAKVTTTTRRPATKKPTRRVSSTV-------KTTTVSSA 1375
            .:      .|||.:.....|...|:|   :|..|.||..  .|..||:.:       |:|.:   
  Fly  1016 VS------PSAVCSILGYSAVNATSV---LTQLTHRPLL--ATVNVSTDIWKMYAKRKSTLM--- 1066

  Fly  1376 RPADDEIVDEEDEEDVNPNPSDNEIDQGATLSSYGGANGRKIHSTSRTLPTPNLAFHSPSTECG- 1439
                        :|..|...:::......|.|:|                           ||| 
  Fly  1067 ------------QEFANCKKTEDYPMADLTCSNY---------------------------ECGR 1092

  Fly  1440 VR--PHVKSGRIVGGKGSTFGAYPWQVLVRESTWLG----LFTKNKCGGVLITSRYVITAAHCQP 1498
            |:  .|..|.||:||..::.|.:|:...:     ||    :|   .|.||||:.::|:||:||  
  Fly  1093 VKRGRHKPSRRIIGGTQASPGNWPFLAAI-----LGGPEKIF---YCAGVLISDQWVLTASHC-- 1147

  Fly  1499 GFLASLVAVMGEFDISGDLES---KRSVTK-----------NVKRVIVHRQYDPA-TFENDLALL 1548
                     :|.:.:. |||.   :..||:           .||.||.|.||:.| ..:||:||.
  Fly  1148 ---------VGNYSVI-DLEDWTIQLGVTRRNSFTYSGQKVKVKAVIPHPQYNMAIAHDNDIALF 1202

  Fly  1549 ELDSPVQFDTHIVPICM-PNDVADF-TGRMATVTGWGR---------LKYGGGVPSVLQEVQVPI 1602
            :|.:.|.|..|::|:|: |..|.:. .|.:.||.|||:         .:|      ::.||||||
  Fly  1203 QLATRVAFHEHLLPVCLPPPSVRNLHPGTLCTVIGWGKREDKDPKSTYEY------IVNEVQVPI 1261

  Fly  1603 IENSVCQEMFHTAGHNKKILTSFLCAGYANGQKDSCEGDSGGPLVLQRP--DGRYELAGTVSHGI 1665
            |..:.|.|..    .|..:....:|||:.:|.||:|:|||||||:...|  ..|:.:.|.||.||
  Fly  1262 ITRNQCDEWL----DNLTVSEGMVCAGFDDGGKDACQGDSGGPLLCPYPGEKNRWFVGGIVSWGI 1322

  Fly  1666 KCAAPYLPGVYMRTTFYKPWLR 1687
            .||.|.|||||.....|.||::
  Fly  1323 MCAHPRLPGVYANVVQYVPWIQ 1344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
flzNP_001137622.1 PRK14948 <272..452 CDD:237862 24/190 (13%)
PRK11633 <365..>439 CDD:236940 4/73 (5%)
PRK10263 <547..>1005 CDD:236669 101/480 (21%)
PHA03247 <792..1096 CDD:223021 72/351 (21%)
Tryp_SPc 1449..1689 CDD:238113 93/271 (34%)
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549 23/137 (17%)
LDLa 911..942 CDD:238060 4/31 (13%)
LDLa 945..979 CDD:238060 4/33 (12%)
SR 980..>1034 CDD:214555 9/59 (15%)
SRCR 992..1086 CDD:278931 20/119 (17%)
Tryp_SPc 1103..1343 CDD:214473 93/269 (35%)
Tryp_SPc 1104..1346 CDD:238113 93/271 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24253
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.