DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment flz and Klkb1

DIOPT Version :10

Sequence 1:NP_001137622.1 Gene:flz / 35902 FlyBaseID:FBgn0286782 Length:1693 Species:Drosophila melanogaster
Sequence 2:NP_036857.2 Gene:Klkb1 / 25048 RGDID:67382 Length:638 Species:Rattus norvegicus


Alignment Length:261 Identity:89/261 - (34%)
Similarity:141/261 - (54%) Gaps:28/261 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly  1435 STECGVRPHVKSGRIVGGKGSTFGAYPWQVLVRESTWLGLFTKN-KCGGVLITSRYVITAAHCQP 1498
            |::|..:   .:.|||||..|:.|.:||||    |..:.|.::| .|||.:|..::::|||||..
  Rat   380 SSDCTTK---INARIVGGTNSSLGEWPWQV----SLQVKLVSQNHMCGGSIIGRQWILTAAHCFD 437

  Fly  1499 GFLASLVAVMGEFDISGDLESKRSVT-----KNVKRVIVHRQYDPATFENDLALLELDSPVQFDT 1558
            |     :.....:.|.|.:.:...:|     .::|.:|:|::|..:....|:||::|.:|:.:..
  Rat   438 G-----IPYPDVWRIYGGILNLSEITNKTPFSSIKELIIHQKYKMSEGSYDIALIKLQTPLNYTE 497

  Fly  1559 HIVPICMPNDVADFTGRMAT---VTGWGRLKYGGGVPSVLQEVQVPIIENSVCQEMFHTAGHNKK 1620
            ...|||:|:. || |..:.|   |||||..|..|...::||:..:|::.|..||:.:    .:..
  Rat   498 FQKPICLPSK-AD-TNTIYTNCWVTGWGYTKERGETQNILQKATIPLVPNEECQKKY----RDYV 556

  Fly  1621 ILTSFLCAGYANGQKDSCEGDSGGPLVLQRPDGRYELAGTVSHGIKCAAPYLPGVYMRTTFYKPW 1685
            |....:||||..|..|:|:||||||||.:. .||::|.|..|.|..||....||||.:...|..|
  Rat   557 ITKQMICAGYKEGGIDACKGDSGGPLVCKH-SGRWQLVGITSWGEGCARKEQPGVYTKVAEYIDW 620

  Fly  1686 L 1686
            :
  Rat   621 I 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
flzNP_001137622.1 PRK11633 <365..>439 CDD:236940
PRK10263 <547..>1005 CDD:236669
PHA03247 <792..1096 CDD:223021
Tryp_SPc 1449..1689 CDD:238113 86/247 (35%)
Klkb1NP_036857.2 APPLE 21..104 CDD:128519
APPLE 111..194 CDD:128519
APPLE 201..284 CDD:128519
APPLE 292..375 CDD:128519
Tryp_SPc 391..621 CDD:238113 85/245 (35%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.