DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment flz and plaua

DIOPT Version :9

Sequence 1:NP_001137622.1 Gene:flz / 35902 FlyBaseID:FBgn0286782 Length:1693 Species:Drosophila melanogaster
Sequence 2:XP_017214157.1 Gene:plaua / 100008445 ZFINID:ZDB-GENE-090313-278 Length:421 Species:Danio rerio


Alignment Length:286 Identity:84/286 - (29%)
Similarity:139/286 - (48%) Gaps:35/286 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly  1425 PTPNLAFHSPSTECGVRPHVKSGRIVGGKGSTFGAYPWQVLVRESTWLGLFTKNKCGGVLITSRY 1489
            |||..........||.|...:..:|:||..||..:.||...:.:..  |..    |||.|||..:
Zfish   140 PTPEPIKQDTELTCGERRLDRQTKIIGGLRSTVESQPWMAAIFKGD--GFI----CGGTLITPCW 198

  Fly  1490 VITAAHCQPGFLASLV----AVMGEFDISGDLESKRSVTKNVKRVIVHRQYDPAT--FENDLALL 1548
            |:|||||.|....:.:    .|:|:..|: :.:..:.....|.|:::|..:|.:|  :.:|:|||
Zfish   199 VLTAAHCFPTGKRTQINRYSVVLGKNAIN-ETDPVKEQKFTVSRLVIHEDFDYSTENYTHDIALL 262

  Fly  1549 ELDS-----PVQFDTHIVPICMPNDVADF-----TGRMATVTGWGRLKYGG-GVPSVLQEVQVPI 1602
            :::.     .|:..| :...|:|    .|     .|....:.|:||.:.|. .....|::.:|.:
Zfish   263 KIEDCNGQCAVKTKT-VRTACLP----PFQQMLPVGFYCEIAGYGRYQKGTFKFSRYLKQTEVKL 322

  Fly  1603 IENSVCQEMFHTAGHNK-KILTSFLCAGYANGQKDSCEGDSGGPLVLQRPDGRYELAGTVSHGIK 1666
            |...|||..:    :|| ::..:.|||...:.:.|:|:||||||||.:..:..: |.|.:|.|.:
Zfish   323 ISQKVCQRTY----YNKDEVNENMLCANGRDWKTDACQGDSGGPLVCEVNNIMF-LFGIISWGKE 382

  Fly  1667 CAAPYLPGVYMRTTFYKPWLRSITGV 1692
            ||....||||.:.:.|..|:...||:
Zfish   383 CAEKNQPGVYTQVSNYNQWISQHTGL 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
flzNP_001137622.1 PRK14948 <272..452 CDD:237862
PRK11633 <365..>439 CDD:236940
PRK10263 <547..>1005 CDD:236669
PHA03247 <792..1096 CDD:223021
Tryp_SPc 1449..1689 CDD:238113 76/257 (30%)
plauaXP_017214157.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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