DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment spab and Dkk4

DIOPT Version :9

Sequence 1:	NP_610434.1	Gene:	spab / 35901	FlyBaseID:	FBgn0033358	Length:	245	Species:	Drosophila melanogaster
Sequence 2:	NP_001102802.1	Gene:	Dkk4 / 502097	RGDID:	1563172	Length:	221	Species:	Rattus norvegicus

Alignment Length:	169	Identity:	36/169 - (21%)
Similarity:	59/169 - (34%)	Gaps:	38/169 - (22%)

- Green bases have known domain annotations that are detailed below.

  Fly    62 LGLDEYLGPYGAVEQEQHQPHPPPQQMRQQTEVYGIVEPLIEDTPCADRPCLLNDDCCPSGVCVS 126
            |||..:..|.||:..:.:       .::..::|.|..:         ...|:.:.||.....|.:
  Rat     7 LGLSWFCSPLGALVLDFN-------NIKSSSDVQGSGK---------GSQCVSDKDCNVGKFCFA 55

  Fly   127 TYGEGKCVYVFGRQRDLCQGHADCPQGSSCMLVPQEGAWRCEPSVE---SGGSTSLLEGI--FGA 186
            .:.|........|.|..||..|.|..|:.|:...........|.::   .|...:..||.  :.|
  Rat    56 LHDERSFCATCRRVRRRCQRSAMCCPGTVCVNDVCTAVENTRPVMDRNTDGQDGTYAEGTTKWPA 120

  Fly   187 KERQPL---------------GSECSSSSDCQVINGMCC 210
            :|.:|.               |..|..:|||.  .|:||
  Rat   121 EENRPQGKPSTKKSQSNKGQEGESCLRTSDCG--PGLCC 157

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
spab	NP_610434.1	None
Dkk4	NP_001102802.1	Dickkopf_N	41..91	CDD:282549	13/49 (27%)
Dkk4	NP_001102802.1	Prokineticin	<145..202	CDD:148298	7/15 (47%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1139517at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010