DRSC/TRiP Functional Genomics Resources

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Protein Alignment babo and XIP1

DIOPT Version :9

Sequence 1:NP_476999.1 Gene:babo / 35900 FlyBaseID:FBgn0011300 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_199777.1 Gene:XIP1 / 835028 AraportID:AT5G49660 Length:966 Species:Arabidopsis thaliana


Alignment Length:324 Identity:92/324 - (28%)
Similarity:144/324 - (44%) Gaps:80/324 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   237 PH---RLTS-WEFVAIILGATLFICFTGTSTWYYCQRRKRMASGRTFAKEDS-------AYDPIL 290
            ||   :|:| |   ||::  ::||...|...:|.   |:||:..|...::|.       :||.  
plant   585 PHGKKKLSSIW---AILV--SVFILVLGVIMFYL---RQRMSKNRAVIEQDETLASSFFSYDV-- 639

  Fly   291 NGNTTIHDIIEMTTSGSGSAGLPLLVQRSIARQVQLCHVIGKGRFGEVWRGRWR-GENVAVKIF- 353
               .:.|.|              ...||.|...:...:::|.|..|.|:|...: ||.||||.. 
plant   640 ---KSFHRI--------------SFDQREILESLVDKNIVGHGGSGTVYRVELKSGEVVAVKKLW 687

  Fly   354 --SSREECSWFR-------EAEIYQTVMLRHENILG----FIAADNKDNGTWTQLWLVTDYHENG 405
              |:::..|..:       :.|:.....:||:||:.    |.:.|..        .||.:|..||
plant   688 SQSNKDSASEDKMHLNKELKTEVETLGSIRHKNIVKLFSYFSSLDCS--------LLVYEYMPNG 744

  Fly   406 SLFDYL---TTHPVDTNTMLNMSLSIATGLAHLHMDIVGTRGKPAIAHRDLKSKNILVKSNLSCA 467
            :|:|.|   ..| ::..|...:::.:|.|||:||.|:     .|.|.|||:||.|||:..|....
plant   745 NLWDALHKGFVH-LEWRTRHQIAVGVAQGLAYLHHDL-----SPPIIHRDIKSTNILLDVNYQPK 803

  Fly   468 IGDLGLA-VRHVEKNDSVDIPSTHRVGTKRYMAPEVLDESMNDQHFDSYKRADVYAFGLILWEI 530
            :.|.|:| |......||.   :|...||..|:|||....|      .:..:.|||:||::|.|:
plant   804 VADFGIAKVLQARGKDST---TTVMAGTYGYLAPEYAYSS------KATIKCDVYSFGVVLMEL 858

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
baboNP_476999.1 Activin_recp 127..214 CDD:279413
GS 294..324 CDD:197743 5/29 (17%)
Pkinase_Tyr 324..611 CDD:285015 69/226 (31%)
STKc_TGFbR1_ACVR1b_ACVR1c 328..615 CDD:271045 69/222 (31%)
XIP1NP_199777.1 PLN00113 47..933 CDD:331614 92/324 (28%)
leucine-rich repeat 73..97 CDD:275380
leucine-rich repeat 98..146 CDD:275380
leucine-rich repeat 147..170 CDD:275380
leucine-rich repeat 171..196 CDD:275380
leucine-rich repeat 197..220 CDD:275380
leucine-rich repeat 221..244 CDD:275380
leucine-rich repeat 245..269 CDD:275380
leucine-rich repeat 270..293 CDD:275380
leucine-rich repeat 294..317 CDD:275380
leucine-rich repeat 318..389 CDD:275380
leucine-rich repeat 342..366 CDD:275380
leucine-rich repeat 367..386 CDD:275380
leucine-rich repeat 390..413 CDD:275380
leucine-rich repeat 414..437 CDD:275380
leucine-rich repeat 438..461 CDD:275380
leucine-rich repeat 462..485 CDD:275380
leucine-rich repeat 486..509 CDD:275380
leucine-rich repeat 510..531 CDD:275380
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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