DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment babo and CRK42

DIOPT Version :9

Sequence 1:NP_476999.1 Gene:babo / 35900 FlyBaseID:FBgn0011300 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_198854.3 Gene:CRK42 / 834036 AraportID:AT5G40380 Length:651 Species:Arabidopsis thaliana


Alignment Length:493 Identity:119/493 - (24%)
Similarity:183/493 - (37%) Gaps:158/493 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 IKCHCDTCKESNNIC----------------------------ETDGFCFTSVEKNSDGSIIFSY 163
            |:||.|.......:|                            ||..|...||...||     |:
plant    88 IQCHDDLSPSDCQLCYAIARTRIPRCLPSSSARIFLDGCFLRYETYEFYDESVSDASD-----SF 147

  Fly   164 RCLHKSQIFPPGRSIWCNDGLHGGPTARPV----------GRNGAHACCK-----DRDFCNRFLW 213
            .|.:.:.:.|       ..|.....||..|          |.||.||..:     .::.|...|.
plant   148 SCSNDTVLDP-------RFGFQVSETAARVAVRKGGFGVAGENGVHALAQCWESLGKEDCRVCLE 205

  Fly   214 PKTKD-QRSDRVEEGRQISVQDYV---PHR-----------------------LTSWEFVAIILG 251
            ...|: :|.....|||.::...|:   .|:                       ||:..||.:||.
plant   206 KAVKEVKRCVSRREGRAMNTGCYLRYSDHKFYNGDGHHKFHVLFNKGVIVAIVLTTSAFVMLILL 270

  Fly   252 ATLFICFTGTSTWYYCQRRKRMASGRTFAKEDSAYDPILNGNTTIHDIIEMTTSGSGSAGLPLLV 316
            || ::..|..|.....:|...:.| |.|....:.:.         ::.:|..|.           
plant   271 AT-YVIMTKVSKTKQEKRNLGLVS-RKFNNSKTKFK---------YETLEKATD----------- 313

  Fly   317 QRSIARQVQLCH--VIGKGRFGEVWRGRW-RGENVAVK--IFSSREECSWFRE--AEIYQTVMLR 374
                    ...|  ::|:|..|.|:.|.. .|:|||||  :|::|:   |..|  .|:.....::
plant   314 --------YFSHKKMLGQGGNGTVFLGILPNGKNVAVKRLVFNTRD---WVEEFFNEVNLISGIQ 367

  Fly   375 HENILGFIAADNKDNGTWTQLWLVTDYHENGS----LFDYLTTHPVDTNTMLNMSLSIATGLAHL 435
            |:|::..:....:.    .:..||.:|..|.|    |||...:..::.:..||:.|..|.|||:|
plant   368 HKNLVKLLGCSIEG----PESLLVYEYVPNKSLDQFLFDESQSKVLNWSQRLNIILGTAEGLAYL 428

  Fly   436 HMDIVGTRGKPA-IAHRDLKSKNILVKSNLSCAIGDLGLA------VRHVEKNDSVDIPSTHRVG 493
            |      .|.|. |.|||:|:.|:|:...|:..|.|.|||      ..|:         ||...|
plant   429 H------GGSPVRIIHRDIKTSNVLLDDQLNPKIADFGLARCFGLDKTHL---------STGIAG 478

  Fly   494 TKRYMAPEVLDESMNDQHFDSYKRADVYAFGLILWEIA 531
            |..|||||.:......:      :||||:||:::.|||
plant   479 TLGYMAPEYVVRGQLTE------KADVYSFGVLVLEIA 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
baboNP_476999.1 Activin_recp 127..214 CDD:279413 26/129 (20%)
GS 294..324 CDD:197743 2/29 (7%)
Pkinase_Tyr 324..611 CDD:285015 70/226 (31%)
STKc_TGFbR1_ACVR1b_ACVR1c 328..615 CDD:271045 70/222 (32%)
CRK42NP_198854.3 Stress-antifung 40..131 CDD:279926 5/42 (12%)
Stress-antifung <174..232 CDD:279926 13/57 (23%)
Pkinase_Tyr 319..588 CDD:285015 69/220 (31%)
STKc_IRAK 321..590 CDD:270968 69/218 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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