DRSC/TRiP Functional Genomics Resources

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Protein Alignment babo and AT3G45410

DIOPT Version :9

Sequence 1:NP_476999.1 Gene:babo / 35900 FlyBaseID:FBgn0011300 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_190127.1 Gene:AT3G45410 / 823679 AraportID:AT3G45410 Length:664 Species:Arabidopsis thaliana


Alignment Length:584 Identity:134/584 - (22%)
Similarity:227/584 - (38%) Gaps:153/584 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 GHAY------QSPSSSLAADNRSHDNNNASAVSMLLPQDGDASG------AVAPAV-------TP 109
            |||:      ..|||||:.  .:|      .|..|:|....|.|      .|:|::       |.
plant    62 GHAFFKKPFDFDPSSSLSF--YTH------FVCALVPPKLGADGGHGIVFVVSPSIDLSHAYATQ 118

  Fly   110 QLPIYIAQPSAKKPENKIKCHCDTCK--ESNNICETDGFCFTSVEKNSDGSIIFSYRCLHKSQIF 172
            .|.::....:.....:.:....||.|  |.|.:.:.    ...::.||..|:..:......:.: 
plant   119 YLGVFSNLTNGTSSSHLLAIELDTVKTVEFNELEKP----HVGIDLNSPISVESALPSYFSNAL- 178

  Fly   173 PPGRSIWCNDGLHGGPTARPVGRNGAHACCKDRDFCNRFLWPKTKDQRSDRVEEGRQISVQD--- 234
              |::|..| .|.|.|....|..:|:        |.|..|.| .:.::.::....|.|::.:   
plant   179 --GKNISIN-LLSGEPIQVWVDYDGS--------FLNVTLAP-IEIKKPNQPLISRAINLSEIFQ 231

  Fly   235 ---YV-----------PHRLTSWEF----------------------------VAIILGATLF-- 255
               ||           .|.:..|.|                            ..:::|..:.  
plant   232 EKMYVGFSSSTGNLLSNHYILGWSFSRRKEQLQSLNLSTLPRVPLPKEEKKKLSPLLIGLVILLV 296

  Fly   256 ---ICFTGTSTWYYCQRRKRMASGRTFAKEDSAYDPILNGNTTIHDIIEMTTSGSGSAGLPLLVQ 317
               :...|...||   |||:.|..:.:.:::  |.|    :...:..:...|:|.          
plant   297 IPVVMVLGGVYWY---RRKKYAEVKEWWEKE--YGP----HRFSYKSLYKATNGF---------- 342

  Fly   318 RSIARQVQLCHVIGKGRFGEVWRGRW-RGENVAVKIFSSREECSWFR-EAEIYQTVMLRHENILG 380
            |...|       :|||.||||::|.. .|.::|||..|...|....: .||:.....|:|.|::.
plant   343 RKDCR-------VGKGGFGEVYKGTLPGGRHIAVKRLSHDAEQGMKQFVAEVVTMGNLQHRNLVP 400

  Fly   381 FIAADNKDNGTWTQLWLVTDYHENGSLFDYLTTHPVDTNTMLNMSLS----IATGLAHLHMDIVG 441
            .:....:.    .:|.||::|..||||..|| .|..:.:......:|    ||:.|::||   .|
plant   401 LLGYCRRK----CELLLVSEYMPNGSLDQYL-FHEGNPSPSWYQRISILKDIASALSYLH---TG 457

  Fly   442 TRGKPAIAHRDLKSKNILVKSNLSCAIGDLGLAVRHVEKNDSVDIPSTHRVGTKRYMAPEVLDES 506
            |  |..:.|||:|:.|:::.|..:..:||.|:|..|   :...::.:|..|||..|||||::.  
plant   458 T--KQVVLHRDIKASNVMLDSEFNGRLGDFGMAKFH---DRGTNLSATAAVGTIGYMAPELIT-- 515

  Fly   507 MNDQHFDSYKRADVYAFGLILWEIARRCNMGMIYDEYQLPYYDVVQPDPSIEEMKKVVCIEKCR 570
                 ..:..:.||||||..|.|:.  |....:..|..:....:|:   .:.|..|..|:.|.|
plant   516 -----MGTSMKTDVYAFGAFLLEVI--CGRRPVEPELPVGKQYLVK---WVYECWKEACLFKTR 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
baboNP_476999.1 Activin_recp 127..214 CDD:279413 19/88 (22%)
GS 294..324 CDD:197743 4/29 (14%)
Pkinase_Tyr 324..611 CDD:285015 75/253 (30%)
STKc_TGFbR1_ACVR1b_ACVR1c 328..615 CDD:271045 75/249 (30%)
AT3G45410NP_190127.1 Lectin_legB 27..272 CDD:278564 45/234 (19%)
STKc_IRAK 348..612 CDD:270968 75/247 (30%)
STYKc 349..610 CDD:214568 75/246 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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