DRSC/TRiP Functional Genomics Resources

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Protein Alignment babo and TGFBR1

DIOPT Version :9

Sequence 1:NP_476999.1 Gene:babo / 35900 FlyBaseID:FBgn0011300 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_001293139.1 Gene:TGFBR1 / 7046 HGNCID:11772 Length:507 Species:Homo sapiens


Alignment Length:538 Identity:289/538 - (53%)
Similarity:359/538 - (66%) Gaps:54/538 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 ASAVSMLLPQDGDASGAVAPAVTPQLPIYIAQPSAKKPENKIKCHCDTCKESNNICETDGFCFTS 150
            |:|.:.|||      ||.|                      ::|.|..|.:.|..|.|||.||.|
Human    21 AAAAAALLP------GATA----------------------LQCFCHLCTKDNFTCVTDGLCFVS 57

  Fly   151 VEKNSDGSIIFSYRCLHKSQIFPPGRSIWCNDGLHGGPTARPVGRNGAHACCKDRDFCNRFLWPK 215
            |.:.:| .:|.:..|:.:..:.|..|...|      .|::: .|......|| ::|.||:...|.
Human    58 VTETTD-KVIHNSMCIAEIDLIPRDRPFVC------APSSK-TGSVTTTYCC-NQDHCNKIELPT 113

  Fly   216 TKDQRSDRVEEGRQISVQDYVPHRLTSWEFVAIILGATLFICFTGTSTWYYCQRRKRMASGRTFA 280
            |           ...||:.  ...|...|..|:|.|...|:|.:.....|.|..| .:...|...
Human   114 T-----------GPFSVKS--SPGLGPVELAAVIAGPVCFVCISLMLMVYICHNR-TVIHHRVPN 164

  Fly   281 KEDSAYD-PILNGNTTIHDII-EMTTSGSGSAGLPLLVQRSIARQVQLCHVIGKGRFGEVWRGRW 343
            :||.:.| |.::..||:.|:| :|||||||| ||||||||:|||.:.|...||||||||||||:|
Human   165 EEDPSLDRPFISEGTTLKDLIYDMTTSGSGS-GLPLLVQRTIARTIVLQESIGKGRFGEVWRGKW 228

  Fly   344 RGENVAVKIFSSREECSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVTDYHENGSLF 408
            |||.|||||||||||.|||||||||||||||||||||||||||||||||||||||:||||:||||
Human   229 RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLF 293

  Fly   409 DYLTTHPVDTNTMLNMSLSIATGLAHLHMDIVGTRGKPAIAHRDLKSKNILVKSNLSCAIGDLGL 473
            |||..:.|....|:.::||.|:|||||||:||||:||||||||||||||||||.|.:|.|.||||
Human   294 DYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 358

  Fly   474 AVRHVEKNDSVDIPSTHRVGTKRYMAPEVLDESMNDQHFDSYKRADVYAFGLILWEIARRCNMGM 538
            ||||....|::||...|||||||||||||||:|:|.:||:|:||||:||.||:.|||||||::|.
Human   359 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGG 423

  Fly   539 IYDEYQLPYYDVVQPDPSIEEMKKVVCIEKCRPNIPNRWHASDVLHNMAKVMKECWYPNPVARLT 603
            |:::|||||||:|..|||:|||:||||.:|.||||||||.:.:.|..|||:|:||||.|..||||
Human   424 IHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLT 488

  Fly   604 ALRIKKTLASISVEDKVK 621
            ||||||||:.:|.::.:|
Human   489 ALRIKKTLSQLSQQEGIK 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
baboNP_476999.1 Activin_recp 127..214 CDD:279413 25/86 (29%)
GS 294..324 CDD:197743 23/30 (77%)
Pkinase_Tyr 324..611 CDD:285015 210/286 (73%)
STKc_TGFbR1_ACVR1b_ACVR1c 328..615 CDD:271045 211/286 (74%)
TGFBR1NP_001293139.1 Activin_recp 35..114 CDD:279413 26/87 (30%)
TGF_beta_GS 180..207 CDD:285687 20/27 (74%)
Pkinase_Tyr 209..496 CDD:285015 210/286 (73%)
STKc_TGFbR1_ACVR1b_ACVR1c 213..500 CDD:271045 211/286 (74%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 447 1.000 Domainoid score I523
eggNOG 1 0.900 - - E2759_KOG2052
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3177
Inparanoid 1 1.050 540 1.000 Inparanoid score I1191
Isobase 1 0.950 - 0 Normalized mean entropy S2949
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D338017at33208
OrthoFinder 1 1.000 - - FOG0000203
OrthoInspector 1 1.000 - - otm40988
orthoMCL 1 0.900 - - OOG6_103647
Panther 1 1.100 - - O PTHR23255
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5155
SonicParanoid 1 1.000 - - X151
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1514.810

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