DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment babo and bmpr1ab

DIOPT Version :9

Sequence 1:NP_476999.1 Gene:babo / 35900 FlyBaseID:FBgn0011300 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_001004585.1 Gene:bmpr1ab / 447846 ZFINID:ZDB-GENE-040912-150 Length:534 Species:Danio rerio


Alignment Length:630 Identity:260/630 - (41%)
Similarity:352/630 - (55%) Gaps:106/630 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLSALRLIFLGALLGASVCASPIEFVMDTSLNGSRSD---PATATHPGKWPPTTKAPALRAPAGT 62
            |.|...:|..|.|: |:|..||:      :..|...|   ..|...||..|       .||.|| 
Zfish     1 MKSTFTIIVFGVLV-AAVLLSPL------AEGGQNPDYMLHGTGVKPGSDP-------RRAQAG- 50

  Fly    63 AGHAYQSPSSSLAADNRSHDNNNASAVSMLLPQDGDASGAVAPAVTPQLPIYIAQPSAKKPENKI 127
                                             ||   ..|||....:.               :
Zfish    51 ---------------------------------DG---STVAPEDAARF---------------L 64

  Fly   128 KCHCD-TCKE--SNNICETDGFCFTSVEKNSDGSIIFSYRCLHKSQIFPPGRSIWCNDGLHGGPT 189
            .|:|. .|.|  :||.|||:|.||..:|::..|..:.:..|:...     |....|.|. ....|
Zfish    65 SCYCSGHCPEDATNNTCETNGHCFAIIEEDEHGEAMLTSGCMKYE-----GSHFQCKDS-PNAQT 123

  Fly   190 ARPVGRNGAHACCKDRDFCNRFLWPKTKDQRSDRVEEGRQISVQDYVPHRLTSW--EFVAIILGA 252
            .|.:      .|| ..|||||.|.|                ::...:|.:...|  ..:|.::..
Zfish   124 RRTI------ECC-STDFCNRDLQP----------------TLPPPIPGKPPFWNAHLLAFLISV 165

  Fly   253 TLFICFTGTSTWYYCQRRKRMASGRTFAKED-SAYDPILNGNTTIHDIIEMTTSGSGSAGLPLLV 316
            |: .|||..:....|..|.::.:||...:.| ...:..:....::.|:|..:::|||| ||||||
Zfish   166 TV-CCFTLVAITIVCYYRFKLQTGRRHYQRDLGPIEAFIPAGESLKDLISQSSTGSGS-GLPLLV 228

  Fly   317 QRSIARQVQLCHVIGKGRFGEVWRGRWRGENVAVKIFSSREECSWFREAEIYQTVMLRHENILGF 381
            ||:||:.:|:...|||||:||||.|||||||||||:|.:|||.|||||.||||||::||||||||
Zfish   229 QRTIAKHIQMVRQIGKGRYGEVWLGRWRGENVAVKVFFTREEASWFRETEIYQTVLMRHENILGF 293

  Fly   382 IAADNKDNGTWTQLWLVTDYHENGSLFDYLTTHPVDTNTMLNMSLSIATGLAHLHMDIVGTRGKP 446
            ||||.|..||:|||:|:|||||||||.|||....:||..:|.::.|.|.||.|||.:|.||:|||
Zfish   294 IAADIKGTGTFTQLFLITDYHENGSLCDYLKYTTLDTQALLRLAYSAACGLCHLHTEIYGTQGKP 358

  Fly   447 AIAHRDLKSKNILVKSNLSCAIGDLGLAVRHVEKNDSVDIPSTHRVGTKRYMAPEVLDESMNDQH 511
            |||||||||||||:|.|.:|.|.||||||::....:.||:|.:.|:||:||||||||||::|...
Zfish   359 AIAHRDLKSKNILIKKNGTCCIADLGLAVKYNSDTNEVDVPLSTRMGTRRYMAPEVLDETLNKNQ 423

  Fly   512 FDSYKRADVYAFGLILWEIARRCNMGMIYDEYQLPYYDVVQPDPSIEEMKKVVCIEKCRPNIPNR 576
            |.:|..||:|::|||:||:||||..|.|.:||||||:|:|..:||.|:|::|||::..||.:.||
Zfish   424 FQAYIMADIYSYGLIVWEMARRCVTGGIVEEYQLPYWDMVPSEPSYEDMREVVCVKSMRPVVSNR 488

  Fly   577 WHASDVLHNMAKVMKECWYPNPVARLTALRIKKTLASISVEDKVK 621
            |::.:.|..|.|:|.|||..||.:||||||:||:||.:.....:|
Zfish   489 WNSDECLRVMLKLMSECWAHNPASRLTALRVKKSLAKMVESQDIK 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
baboNP_476999.1 Activin_recp 127..214 CDD:279413 28/89 (31%)
GS 294..324 CDD:197743 16/29 (55%)
Pkinase_Tyr 324..611 CDD:285015 176/286 (62%)
STKc_TGFbR1_ACVR1b_ACVR1c 328..615 CDD:271045 177/286 (62%)
bmpr1abNP_001004585.1 Activin_recp 64..143 CDD:279413 29/107 (27%)
TyrKc 236..523 CDD:197581 176/286 (62%)
PKc_like 240..526 CDD:304357 177/285 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D338017at33208
OrthoFinder 1 1.000 - - FOG0000203
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X151
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

Return to query results.
Submit another query.