DRSC/TRiP Functional Genomics Resources

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Protein Alignment babo and Tgfbr1

DIOPT Version :10

Sequence 1:NP_476999.1 Gene:babo / 35900 FlyBaseID:FBgn0011300 Length:622 Species:Drosophila melanogaster
Sequence 2:XP_036019848.1 Gene:Tgfbr1 / 21812 MGIID:98728 Length:544 Species:Mus musculus


Alignment Length:585 Identity:297/585 - (50%)
Similarity:370/585 - (63%) Gaps:68/585 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 KAPALR---------APAGTAGHAYQSPSSSLAADNRSHDNNNASAVSMLLPQDGDASGAVAPAV 107
            :|||.|         :|.|..|...|.|.....||.....|:.                      
Mouse    12 RAPAWRRSGAGRLEGSPEGRKGRRGQRPRVGRTADEYGSLNSK---------------------- 54

  Fly   108 TPQLPIYIAQPSAKKPE-NKIKCHCDTCKESNNICETDGFCFTSVEKNSDGSIIFSYRCLHKSQI 171
                .:|..:..:.|.. :.::|.|..|.:.|..|||||.||.||.:.:| .:|.:..|:.:..:
Mouse    55 ----KLYFLRGRSNKVSISALQCFCHLCTKDNFTCETDGLCFVSVTETTD-KVIHNSMCIAEIDL 114

  Fly   172 FPPGRSIWCNDGLHGGPTARPVGRNGAHA---CCKDRDFCNRFLWPKTKDQRSDRVEEGRQISVQ 233
            .|..|...|          .|..:.||..   || ::|.||:...| |....|::...|      
Mouse   115 IPRDRPFVC----------APSSKTGAVTTTYCC-NQDHCNKIELP-TTGPFSEKQSAG------ 161

  Fly   234 DYVPHRLTSWEFVAIILGATLFICFTGTSTWYYCQRRKRMASGRTFAKEDSAYD-PILNGNTTIH 297
                  |...|..|:|.|...|:|.......|.|..| .:...|...:||.:.| |.::..||:.
Mouse   162 ------LGPVELAAVIAGPVCFVCIALMLMVYICHNR-TVIHHRVPNEEDPSLDRPFISEGTTLK 219

  Fly   298 DII-EMTTSGSGSAGLPLLVQRSIARQVQLCHVIGKGRFGEVWRGRWRGENVAVKIFSSREECSW 361
            |:| :|||||||| ||||||||:|||.:.|...||||||||||||:||||.|||||||||||.||
Mouse   220 DLIYDMTTSGSGS-GLPLLVQRTIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSW 283

  Fly   362 FREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVTDYHENGSLFDYLTTHPVDTNTMLNMSL 426
            |||||||||||||||||||||||||||||||||||||:||||:|||||||..:.|....|:.::|
Mouse   284 FREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLAL 348

  Fly   427 SIATGLAHLHMDIVGTRGKPAIAHRDLKSKNILVKSNLSCAIGDLGLAVRHVEKNDSVDIPSTHR 491
            |.|:|||||||:||||:||||||||||||||||||.|.:|.|.||||||||....|::||...||
Mouse   349 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR 413

  Fly   492 VGTKRYMAPEVLDESMNDQHFDSYKRADVYAFGLILWEIARRCNMGMIYDEYQLPYYDVVQPDPS 556
            |||||||||||||:|:|.:||:|:||||:||.||:.|||||||::|.|:::|||||||:|..|||
Mouse   414 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS 478

  Fly   557 IEEMKKVVCIEKCRPNIPNRWHASDVLHNMAKVMKECWYPNPVARLTALRIKKTLASISVEDKVK 621
            :|||:||||.:|.||||||||.:.:.|..|||:|:||||.|..||||||||||||:.:|.::.:|
Mouse   479 VEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGIK 543

  Fly   622  621
            Mouse   544  543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
baboNP_476999.1 TFP_LU_ECD_Babo 127..210 CDD:467127 26/85 (31%)
GS 294..324 CDD:197743 23/30 (77%)
STKc_TGFbR1_ACVR1b_ACVR1c 328..615 CDD:271045 211/286 (74%)
Tgfbr1XP_036019848.1 TFP_LU_ECD_ALK5 71..145 CDD:467067 26/85 (31%)
TGF_beta_GS 217..244 CDD:462503 20/27 (74%)
STKc_TGFbR1_ACVR1b_ACVR1c 250..537 CDD:271045 211/286 (74%)

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