DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment babo and daf-1

DIOPT Version :9

Sequence 1:NP_476999.1 Gene:babo / 35900 FlyBaseID:FBgn0011300 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_001023159.1 Gene:daf-1 / 176829 WormBaseID:WBGene00000897 Length:669 Species:Caenorhabditis elegans


Alignment Length:590 Identity:180/590 - (30%)
Similarity:272/590 - (46%) Gaps:132/590 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 CHCDT---CKES-------------------NNICETDGFCFTSVEKNSDGSIIFSYRCLHKSQI 171
            |||..   |...                   .|.|.|||.|:.|...:.:   |..:.|:.:..:
 Worm    56 CHCSREVGCNARTTGWVPGIEFLNETDRSFYENTCYTDGSCYQSARPSPE---ISHFGCMDEKSV 117

  Fly   172 FPPGRSIWCNDGLHGGPTARPVGRNGA---HA----CCKDRDFCNRFLWPKTKDQRSDRVEEGRQ 229
                     .|......||..|..|..   ||    ||...:||        .::....:..|  
 Worm   118 ---------TDETEFHDTAAKVCTNNTKDPHATVWICCDKGNFC--------ANETIIHLAPG-- 163

  Fly   230 ISVQDYVPHRLTSWEFVAI--------ILGATLFI---CFTGTSTWYYCQRRK------------ 271
                   |.:.::|..:.|        :||..:|:   .:.....||...:.|            
 Worm   164 -------PQQSSTWLILTILALLTFIVLLGIAIFLTRKSWEAKFDWYIRFKPKPGDPLRETENNV 221

  Fly   272 ---RMASGRTFAKEDSAYDPILNGNTTIH--------------------DIIEMTTSGSGSAGLP 313
               .|..|...:..:.|  ||....:|:.                    |::| .||||| .|..
 Worm   222 PMVTMGDGAGSSVPEVA--PIEQQGSTMSTSAGNSFPPGIMPNNMKDMLDVLE-ETSGSG-MGPT 282

  Fly   314 LLVQRSIARQVQLCHVIGKGRFGEVWRGRWRGENVAVKIFSSREECSWFREAEIYQTVMLRHENI 378
            .|.:.:|..|::|...:|.||||.|.||.:|||.||||:|::.:|.::.:|.||::|.||||.|:
 Worm   283 TLHKLTIGGQIRLTGRVGSGRFGNVSRGDYRGEAVAVKVFNALDEPAFHKETEIFETRMLRHPNV 347

  Fly   379 LGFIAADNKDNGTWTQLWLVTDYHENGSLFDYLTTHPVDTNTMLNMSLSIATGLAHLHMDIVGTR 443
            |.:|.:|..|.|..|:|||||:||.:|||.|:|..:.|:..|..|:..|.|:|||.||..|.|::
 Worm   348 LRYIGSDRVDTGFVTELWLVTEYHPSGSLHDFLLENTVNIETYYNLMRSTASGLAFLHNQIGGSK 412

  Fly   444 --GKPAIAHRDLKSKNILVKSNLSCAIGDLGLAVRHVEKNDSVDIPS-THRVGTKRYMAPEVLDE 505
              .|||:||||:|||||:||::|:||||||||::...|...|..|.: .::.||.||:|||:|:.
 Worm   413 ESNKPAMAHRDIKSKNIMVKNDLTCAIGDLGLSLSKPEDAASDIIANENYKCGTVRYLAPEILNS 477

  Fly   506 SMNDQHFDSYKRADVYAFGLILWEIARRCNMGMIYDEYQ---LPYYDVVQPDPSIEEMKKVVCIE 567
            :|....|:||:.||||:|.|::||...||..|.:.....   :||.:....||...:|..|||..
 Worm   478 TMQFTVFESYQCADVYSFSLVMWETLCRCEDGDVLPREAATVIPYIEWTDRDPQDAQMFDVVCTR 542

  Fly   568 KCRPNIPNRWHASDVLHNMAKVMKECWYPNPVARLTALRIKKTL------------------ASI 614
            :.||.....|.....:.::.:::|.||..||.||.|:...:|.:                  |.:
 Worm   543 RLRPTENPLWKDHPEMKHIMEIIKTCWNGNPSARFTSYICRKRMDERQQLLLDKKAKAVAQTAGV 607

  Fly   615 SVEDK 619
            :|:|:
 Worm   608 TVQDR 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
baboNP_476999.1 Activin_recp 127..214 CDD:279413 24/113 (21%)
GS 294..324 CDD:197743 11/49 (22%)
Pkinase_Tyr 324..611 CDD:285015 126/292 (43%)
STKc_TGFbR1_ACVR1b_ACVR1c 328..615 CDD:271045 126/310 (41%)
daf-1NP_001023159.1 GS 265..293 CDD:197743 10/29 (34%)
Pkinase_Tyr 293..576 CDD:285015 122/282 (43%)
STKc_TGFbR_I 297..589 CDD:270958 125/291 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158741
Domainoid 1 1.000 238 1.000 Domainoid score I1286
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000203
OrthoInspector 1 1.000 - - otm14704
orthoMCL 1 0.900 - - OOG6_103647
Panther 1 1.100 - - LDO PTHR23255
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5155
SonicParanoid 1 1.000 - - X151
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.870

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