DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment babo and Acvrl1

DIOPT Version :9

Sequence 1:NP_476999.1 Gene:babo / 35900 FlyBaseID:FBgn0011300 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_001264184.1 Gene:Acvrl1 / 11482 MGIID:1338946 Length:517 Species:Mus musculus


Alignment Length:529 Identity:235/529 - (44%)
Similarity:303/529 - (57%) Gaps:97/529 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 KPENKIKCHCDT--CKESNNICETDGFCFTSVEKNSDGSIIFSYRCLHKSQIFPPGRSIWC---- 180
            ||...:.|.|::  ||..        ||        .||                    ||    
Mouse    41 KPSKLVNCTCESPHCKRP--------FC--------QGS--------------------WCTVVL 69

  Fly   181 --NDGLH----------------GGPTARPVGRNGAHACCKDRDFCNR--FLWPKTKDQRSDRVE 225
              ..|.|                |.||     ....|.||. |.|||.  .|..:.....|:..|
Mouse    70 VREQGRHPQVYRGCGSLNQELCLGRPT-----EFLNHHCCY-RSFCNHNVSLMLEATQTPSEEPE 128

  Fly   226 EGRQISVQDYVPHRLTSWEFVAIILGATL----FICFTGTSTWYYCQRRKRMASGRTFAKEDSAY 286
                  |..::|          :|||..|    .:.......|...:|:::.....:...|.|. 
Mouse   129 ------VDAHLP----------LILGPVLALPVLVALGALGLWRVRRRQEKQRDLHSDLGESSL- 176

  Fly   287 DPIL----NGNTTIHDIIEM-TTSGSGSAGLPLLVQRSIARQVQLCHVIGKGRFGEVWRGRWRGE 346
              ||    ..::.:.|.::. .|:|||| |||.||||::||||.|...:||||:||||||.|.||
Mouse   177 --ILKASEQADSMLGDFLDSDCTTGSGS-GLPFLVQRTVARQVALVECVGKGRYGEVWRGSWHGE 238

  Fly   347 NVAVKIFSSREECSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVTDYHENGSLFDYL 411
            :|||||||||:|.|||||.|||.||:|||:|||||||:|.....:.|||||:|.|||:|||:|:|
Mouse   239 SVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFL 303

  Fly   412 TTHPVDTNTMLNMSLSIATGLAHLHMDIVGTRGKPAIAHRDLKSKNILVKSNLSCAIGDLGLAVR 476
            ....::....|.:::|.|.||||||::|.||:||||||||||||:|:||||||.|.|.||||||.
Mouse   304 QRQTLEPQLALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDLKSRNVLVKSNLQCCIADLGLAVM 368

  Fly   477 HVEKNDSVDIPSTHRVGTKRYMAPEVLDESMNDQHFDSYKRADVYAFGLILWEIARRCNMGMIYD 541
            |.:.:|.:||.:..|||||||||||||||.:....|:|||..|::||||:|||||||..:..|.:
Mouse   369 HSQSSDYLDIGNNPRVGTKRYMAPEVLDEHIRTDCFESYKWTDIWAFGLVLWEIARRTIINGIVE 433

  Fly   542 EYQLPYYDVVQPDPSIEEMKKVVCIEKCRPNIPNRWHASDVLHNMAKVMKECWYPNPVARLTALR 606
            :|:.|:||:|..|||.|:||||||:::..|.||||..|..||..:|::|:|||||||.|||||||
Mouse   434 DYRPPFYDMVPNDPSFEDMKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPNPSARLTALR 498

  Fly   607 IKKTLASIS 615
            |||||..:|
Mouse   499 IKKTLQKLS 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
baboNP_476999.1 Activin_recp 127..214 CDD:279413 23/112 (21%)
GS 294..324 CDD:197743 15/30 (50%)
Pkinase_Tyr 324..611 CDD:285015 177/286 (62%)
STKc_TGFbR1_ACVR1b_ACVR1c 328..615 CDD:271045 177/286 (62%)
Acvrl1NP_001264184.1 LU 48..112 CDD:299177 22/105 (21%)
TGF_beta_GS 187..214 CDD:285687 13/27 (48%)
STKc_ACVR1_ALK1 210..507 CDD:271044 183/296 (62%)
Pkinase_Tyr 216..503 CDD:285015 177/286 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167834700
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D338017at33208
OrthoFinder 1 1.000 - - FOG0000203
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X151
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.750

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