DRSC/TRiP Functional Genomics Resources

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Protein Alignment babo and Acvr1

DIOPT Version :9

Sequence 1:NP_476999.1 Gene:babo / 35900 FlyBaseID:FBgn0011300 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_001103674.1 Gene:Acvr1 / 11477 MGIID:87911 Length:509 Species:Mus musculus


Alignment Length:533 Identity:250/533 - (46%)
Similarity:333/533 - (62%) Gaps:56/533 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 LPI--YIAQPSAKKPENKIK-------CHCD--TCKESNNICETDGFCFTSVEKNSDGSIIFSYR 164
            ||:  .:|.||....:.|.|       |.|:  :|...:: ||... ||:|:..| ||..::...
Mouse     8 LPVLMMMAFPSPSVEDEKPKVNQKLYMCVCEGLSCGNEDH-CEGQQ-CFSSLSIN-DGFHVYQKG 69

  Fly   165 CLHKSQIFPPGRSIWCNDGLHGGPTARPVGRNGAHACCKDRDFCNRFLWPK--TKDQRSDRVEEG 227
            |.   |::..|: :.|.         .|.....|..||:. |:|||.:..:  ||         |
Mouse    70 CF---QVYEQGK-MTCK---------TPPSPGQAVECCQG-DWCNRNITAQLPTK---------G 111

  Fly   228 RQI-SVQDYVPHRLTSWEFVAIILGATLFICFTGTSTWYYCQRRKRMASGRTFAKEDSAYDPILN 291
            :.. ..|::  |.......::::....|..|..|.:...:.:|.:...:.|     |..|..|..
Mouse   112 KSFPGTQNF--HLEVGLIILSVVFAVCLLACILGVALRKFKRRNQERLNPR-----DVEYGTIEG 169

  Fly   292 ------GNTTIHDIIEMT-TSGSGSAGLPLLVQRSIARQVQLCHVIGKGRFGEVWRGRWRGENVA 349
                  |::|:.::::.: |||||| |||.||||::|||:.|...:||||:||||||.|:|||||
Mouse   170 LITTNVGDSTLAELLDHSCTSGSGS-GLPFLVQRTVARQITLLECVGKGRYGEVWRGSWQGENVA 233

  Fly   350 VKIFSSREECSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVTDYHENGSLFDYLTTH 414
            |||||||:|.|||||.|:|.||||||||||||||:|.....:.|||||:|.|||.|||:|||...
Mouse   234 VKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLT 298

  Fly   415 PVDTNTMLNMSLSIATGLAHLHMDIVGTRGKPAIAHRDLKSKNILVKSNLSCAIGDLGLAVRHVE 479
            .:||.:.|.:.||||:||||||::|.||:||.|||||||||||||||.|..|.|.||||||.|.:
Mouse   299 TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKSAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQ 363

  Fly   480 KNDSVDIPSTHRVGTKRYMAPEVLDESMNDQHFDSYKRADVYAFGLILWEIARRCNMGMIYDEYQ 544
            ..:.:|:.:..|||||||||||||||::....||||||.|::||||:|||:|||.....|.::|:
Mouse   364 STNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYK 428

  Fly   545 LPYYDVVQPDPSIEEMKKVVCIEKCRPNIPNRWHASDVLHNMAKVMKECWYPNPVARLTALRIKK 609
            .|:||||..|||.|:|:||||:::.||||||||.:...|.::||:||||||.||.||||||||||
Mouse   429 PPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK 493

  Fly   610 TLASISVE-DKVK 621
            ||..|... ||:|
Mouse   494 TLTKIDNSLDKLK 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
baboNP_476999.1 Activin_recp 127..214 CDD:279413 24/95 (25%)
GS 294..324 CDD:197743 16/30 (53%)
Pkinase_Tyr 324..611 CDD:285015 183/286 (64%)
STKc_TGFbR1_ACVR1b_ACVR1c 328..615 CDD:271045 184/286 (64%)
Acvr1NP_001103674.1 Activin_recp 33..103 CDD:366445 23/86 (27%)
TGF_beta_GS 179..206 CDD:369918 14/27 (52%)
STKc_ACVR1_ALK1 202..499 CDD:271044 189/296 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167834714
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000203
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X151
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.740

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