DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment babo and Amhr2

DIOPT Version :9

Sequence 1:NP_476999.1 Gene:babo / 35900 FlyBaseID:FBgn0011300 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_001343504.1 Gene:Amhr2 / 110542 MGIID:105062 Length:568 Species:Mus musculus


Alignment Length:497 Identity:148/497 - (29%)
Similarity:220/497 - (44%) Gaps:90/497 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   164 RCLHKSQIFPPGRSIW-------------CNDGLHGG---------PTARPVGRNGAHACCKDRD 206
            |||:....|    .||             |.|....|         |.|.|...:....|....|
Mouse    54 RCLYSHCCF----GIWNLTHGRAQVEMQGCRDSDEPGCESLHCDPVPRAHPNPSSTLFTCSCGTD 114

  Fly   207 FCNRFLWPKTKDQRSDRVEEGRQISVQDYVPHRLTS---WEFVAIILGATLFICFTGTSTWYYCQ 268
            |||.        ..|.....|.|.:.....|.....   |  :|::|.....:....:......|
Mouse   115 FCNA--------NYSHLPPSGNQGAPGPQEPQATPGGPVW--MALLLLGMFLVLLLSSIILALLQ 169

  Fly   269 RRKRMASGRTFAKEDSAYDPILNGNTTIHDIIEMTTSGSGSAGLPLLVQRSIARQVQLCHVIGKG 333
            |:.....|.:        ||            |..:.|..|..||.|.      :::...||.:|
Mouse   170 RKACRVQGGS--------DP------------EPGSGGDCSEELPELA------ELRFSQVIQEG 208

  Fly   334 RFGEVWRGRWRGENVAVKIFSSREECSWFREAEIYQTVMLRHENILGFIAADNKDNGTW-TQLWL 397
            ....||.||.:||.||:|.|..|....:..|..:||.:.|:|::|:.||.|.....|.. :...|
Mouse   209 GHAVVWAGRLQGEMVAIKAFPPRAVAQFRAERAVYQLLGLQHDHIVRFITAGQGGPGPLPSGPLL 273

  Fly   398 VTDYHENGSLFDYLTTHPVDTNTMLNMSLSIATGLAHLHMD-IVGTRGKPAIAHRDLKSKNILVK 461
            |.:.:..|||..|||.:..|..:.|.|:||:|.|||.||.: ....:.||.||||||.|:|:|::
Mouse   274 VLELYPKGSLCHYLTQYTSDWGSSLRMALSLAEGLAFLHEERWQDGQYKPGIAHRDLSSQNVLIR 338

  Fly   462 SNLSCAIGDLGLAVRHVEKNDSVDIPSTH--------RVGTKRYMAPEVLDESMNDQHF-DSYKR 517
            .:.||||||||||:..........:..|.        ..||:||||||:||::::.|.: .:.:|
Mouse   339 EDRSCAIGDLGLALVLPGLAQPPALAPTQPRGPAAILEAGTQRYMAPELLDKTLDLQDWGTALQR 403

  Fly   518 ADVYAFGLILWEIARRCNMGMIYD--------EYQLPYYDVVQPDPSIEEMKKVVCIEKCRPNIP 574
            ||||:..|:||||..||:     |        .:||.|...:..:||..|:..:...|:.|||||
Mouse   404 ADVYSLALLLWEILSRCS-----DLRPDHRPPPFQLAYEAELGSNPSACELWALAVEERKRPNIP 463

  Fly   575 NRWHASDV-LHNMAKVMKECWYPNPVARLTALRIKKTLASIS 615
            :.|..|.. ...:.:::::||..:|.|||||..:::.||:::
Mouse   464 STWSCSATDPRGLRELLEDCWDADPEARLTAECVQQRLAALA 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
baboNP_476999.1 Activin_recp 127..214 CDD:279413 17/71 (24%)
GS 294..324 CDD:197743 6/29 (21%)
Pkinase_Tyr 324..611 CDD:285015 111/306 (36%)
STKc_TGFbR1_ACVR1b_ACVR1c 328..615 CDD:271045 113/306 (37%)
Amhr2NP_001343504.1 Activin_recp <61..119 CDD:307282 14/69 (20%)
PKc_like 203..504 CDD:328722 113/305 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167834707
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.840

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