Protein Alignment PAN2 and AT5G40310

DIOPT Version :10

• Sequence 1: NP_610427.2
• Gene: PAN2 / 35893
• FlyBaseID: FBgn0033352
• Length: 1241
• Species: Drosophila melanogaster
• Sequence 2: NP_001330756.1
• Gene: AT5G40310 / 834029
• AraportID: AT5G40310
• Length: 357
• Species: Arabidopsis thaliana
• Alignment Length: 261
• Identity: 62/261 - (23%)
• Similarity: 102/261 - (39%)
• Gaps: 63/261 - (24%)

  Fly  1004 LEEIVSPMLGNLSA-----DATLQPLQSDEMPQSGDLVAMDAEFVTLNPEENEIRPDGKTATIKP 1063
            |..:.|.::..::|     ::|:....|    :|..:||:..:.|          ..|...::..
plant   103 LSNVTSGLMIRMAALGLRNNSTIDYTSS----RSPRVVALSCKMV----------GGGSDGSLDL 153

  Fly  1064 CHMSVARISCIRGQGPAEGVPFMDDYISTQEKVVDYLTQFSGIKPGDL-DANFSKKRLTALKYSY 1127
            |    ||: ||..:  :|.|.| ..|:.....|.:|..:.:||:|.:| ||       ..||::.
plant   154 C----ARV-CITDE--SENVVF-HTYVKPTIPVTNYRYEMTGIRPENLRDA-------MRLKHAQ 203

  Fly  1128 QKLKYLVDVGV-------------IFVGHGLKNDFRVINIYVPSEQIIDTVHLFHMPHHRMV--S 1177
            :|::..:..|.             |.|||||.|....:.:...|..|.||.....:.....:  |
plant   204 RKVQEFLCNGEPMWKIRPRNGKARILVGHGLDNHLDSLQLEYSSSMIRDTAEYPPLMKSSKLSNS 268

  Fly  1178 LRFLAWHFLGTKIQSETHDSIEDARTTLQLY------KHYLK-------LQEEKKFANALKNLYE 1229
            |::|...:||..|.....|..||...|::||      ||..:       .|....||...:|..|
plant   269 LKYLTQAYLGYDIHVGIQDPYEDCVATMRLYTRMRYQKHRAEAYPLASDTQNHNNFAAWRQNELE 333

  Fly  1230 R 1230
            |
plant   334 R 334

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
PAN2	NP_610427.2	WD40	63..>270	CDD:475233
		WD40 repeat	148..183	CDD:293791
		WD40 repeat	187..221	CDD:293791
		WD40 repeat	227..273	CDD:293791
		WD40 repeat	278..314	CDD:293791
		UCH_1	505..940	CDD:463872
		zf-CCCH_2	799..816	CDD:464217
		PAN2_exo	1036..1209	CDD:99846	48/194 (25%)
AT5G40310	NP_001330756.1	C2H2 Zn finger	17..39	CDD:275371
		C2H2 Zn finger	46..63	CDD:275371
		REX4_like	136..300	CDD:99847	47/188 (25%)