DRSC/TRiP Functional Genomics Resources

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Protein Alignment PAN2 and AT5G25800

DIOPT Version :10

Sequence 1:NP_610427.2 Gene:PAN2 / 35893 FlyBaseID:FBgn0033352 Length:1241 Species:Drosophila melanogaster
Sequence 2:NP_001331646.1 Gene:AT5G25800 / 832649 AraportID:AT5G25800 Length:569 Species:Arabidopsis thaliana


Alignment Length:418 Identity:97/418 - (23%)
Similarity:152/418 - (36%) Gaps:123/418 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   899 DDGTQKNLV--SLINVQRP-------YHTMKLAESADDPQS--QWYIFNDFSIS-------PVSP 945
            ||||.|:..  |..::..|       :.:.:...:..|.|.  .|.:...|..|       |:.|
plant    18 DDGTDKSNTGNSFFDIYGPEAKAELDFKSPETTLNLQDVQGLVTWVLAEGFMPSWVFIKNKPLIP 82

  Fly   946 QESVWFT--LDWKVPCILFYRH------------------------VEDDSESAST-------TS 977
            :..:.:.  ||    ..|:..|                        |.|:..:..|       ..
plant    83 KVVLLYLPGLD----AALYLSHSKTLSSLKSCCGNPMALLALRLVCVVDEMRTIDTILTCKGRKK 143

  Fly   978 STVTESEETIPSESSSGSPTNLSNPFLEEIVSPMLGNLSADATLQPLQSDEMPQSG--------- 1033
            .|||.|.|..|..||..:...:...|:|     :..::....:...|...||.|:|         
plant   144 KTVTSSVEPPPLVSSPEACNLMGKSFVE-----LTKDIPFPVSYYTLSQKEMEQNGYTFEKLELT 203

  Fly  1034 ------------DLVAMDAEFVTLNPEENEIRPDGKTATIKPCHMSVARISCIRGQGPAEGVPFM 1086
                        ::||:|.|..        |..:|         :.:.|::.:..||..    .:
plant   204 PTLPAPSGSCPPEIVALDCEMC--------ITKEG---------LELTRVTLVDIQGQV----LL 247

  Fly  1087 DDYISTQEKVVDYLTQFSGIKPGDLDANFSKKRLTALKYSYQKLKYLVDVGVIFVGHGLKNDFRV 1151
            |..:.....:.||.|::|||     .|...:...|.||...::...||....|.|||.|:||  :
plant   248 DKLVMPTNPITDYNTRYSGI-----TAVMMEGVTTTLKDIQEEFLKLVFKETILVGHSLEND--L 305

  Fly  1152 INIYVPSEQIIDTVHLFHMPHHR--MVSLRFLAWHFLGTKIQ-SET-HDSIEDARTTLQLYKHYL 1212
            :::.:....:|||..|:..||.|  ...||.||..||..:|| ||: |||.|||:..:.|  ..|
plant   306 LSLKISHNLVIDTAVLYKHPHGRSYKTKLRILAKKFLAREIQESESGHDSAEDAKAAMDL--ALL 368

  Fly  1213 KLQEEKKFAN--------ALKNLYERGK 1232
            |::....|.:        .|..|.|.||
plant   369 KIKHGPDFGSPPEVIRKKLLAVLNESGK 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PAN2NP_610427.2 WD40 63..>270 CDD:475233
WD40 repeat 148..183 CDD:293791
WD40 repeat 187..221 CDD:293791
WD40 repeat 227..273 CDD:293791
WD40 repeat 278..314 CDD:293791
UCH_1 505..940 CDD:463872 11/51 (22%)
zf-CCCH_2 799..816 CDD:464217
PAN2_exo 1036..1209 CDD:99846 53/176 (30%)
AT5G25800NP_001331646.1 REX1_like 218..367 CDD:99848 53/178 (30%)
Blue background indicates that the domain is not in the aligned region.

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