DRSC/TRiP Functional Genomics Resources

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Protein Alignment PAN2 and Aen

DIOPT Version :10

Sequence 1:NP_610427.2 Gene:PAN2 / 35893 FlyBaseID:FBgn0033352 Length:1241 Species:Drosophila melanogaster
Sequence 2:NP_080807.3 Gene:Aen / 68048 MGIID:1915298 Length:336 Species:Mus musculus


Alignment Length:239 Identity:70/239 - (29%)
Similarity:102/239 - (42%) Gaps:56/239 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly  1028 EMPQSGDL--VAMDAEFVTLNPEENEIRPDGKTATIKPCHMSVARISCIRGQGPAEGVPFMDDYI 1090
            |.|:.|.:  ||:|.|.|...|:       |:.:.:..|  ||...|         |....|.||
Mouse   100 EAPRPGPIKCVAIDCEMVGTGPQ-------GRVSELARC--SVVSYS---------GDVLYDKYI 146

  Fly  1091 STQEKVVDYLTQFSGIKPGDLDANF-----SKKRLTALKYSYQKLKYLVDVGVIFVGHGLKNDFR 1150
            ..:..:|||.|::|||....:....     .|:.|..||            |.:.|||.|.|||:
Mouse   147 RPEMPIVDYRTRWSGITRQHMHKAIPFQVAQKEILKLLK------------GKVVVGHALHNDFQ 199

  Fly  1151 VINIYVPSEQIIDTVH---LFHMPH---HRMVSLRFLAWHFLGTKIQ--SETHDSIEDARTTLQL 1207
            .:....|..|..||.:   |...|.   ...|||:.||.:.|..|||  .:.|.|:|||.|.::|
Mouse   200 ALKYVHPRSQTRDTTYVPNLLSQPSSLIRTRVSLKDLALNLLHKKIQVGHQGHSSVEDAMTAMEL 264

  Fly  1208 YKHYLKLQEEKKFANALKNLYE-RGKQLQWKV---------PED 1241
            |: .:::|.|::.|::.:...| ||......|         |||
Mouse   265 YQ-LVEVQWEQQVASSAQAPAEDRGPDSSTDVEQYMDDQYWPED 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PAN2NP_610427.2 WD40 63..>270 CDD:475233
WD40 repeat 148..183 CDD:293791
WD40 repeat 187..221 CDD:293791
WD40 repeat 227..273 CDD:293791
WD40 repeat 278..314 CDD:293791
UCH_1 505..940 CDD:463872
zf-CCCH_2 799..816 CDD:464217
PAN2_exo 1036..1209 CDD:99846 56/185 (30%)
AenNP_080807.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..37
Nucleolar localization signal. /evidence=ECO:0000250 25..33
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 56..102 1/1 (100%)
DnaQ_like_exo 110..266 CDD:447876 56/185 (30%)
Nuclear localization signal. /evidence=ECO:0000250 164..187 4/34 (12%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 276..336 8/32 (25%)
Blue background indicates that the domain is not in the aligned region.

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