DRSC/TRiP Functional Genomics Resources

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Protein Alignment PAN2 and Eqtn

DIOPT Version :9

Sequence 1:NP_610427.2 Gene:PAN2 / 35893 FlyBaseID:FBgn0033352 Length:1241 Species:Drosophila melanogaster
Sequence 2:NP_081365.2 Gene:Eqtn / 67753 MGIID:1915003 Length:337 Species:Mus musculus


Alignment Length:323 Identity:63/323 - (19%)
Similarity:106/323 - (32%) Gaps:107/323 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   603 NRFILHQMHYEIFDSSKNAST---YSG----------------SVQTSTNAE-----NAGSSETS 643
            |...||::.....|:..|..|   |..                ||..:||.|     |..:|:.:
Mouse    49 NSVALHKLEENEMDTPANEKTGNYYKDIKQYVFTTPNIKGSEVSVTATTNLEFAVKKNYKASKPT 113

  Fly   644 GSSDLYDSISDENSKEDDRERSKINAE---TDISKIFGTKQICI------------------NRC 687
            .|.:      :|...|..|:.|..|..   |.:||......:.:                  |..
Mouse   114 ASGE------EEKPSESSRKTSTPNIPAFWTILSKAVNETAVSMDDKDQFFQPIPASDLNATNED 172

  Fly   688 IKCQEEKIKESILLACNLS-----YPNHIKDSDQYFNFGTILK------RSLSSEKSIQAFCERC 741
            ...:.|:||..::|..:|.     .|..|      |.|.|:.|      :|..|:.||.......
Mouse   173 KLSELEEIKLKLMLGISLMTLVLLIPLLI------FCFATLYKLRHLRDKSYESQYSINPELATL 231

  Fly   742 KKFSPTNQSVKVTSLPQILSINC-GLNNEKDITFLKRQLNRCSEKTTVDAAASLSTSKPCRYGAN 805
            ..|.|| :.|..||..:....|. .::|..:   ::|...|.|:            |||..:.|.
Mouse   232 SYFHPT-EGVSDTSFSKSADSNSYWVHNSSE---MRRSRTRRSK------------SKPMDFSAG 280

  Fly   806 CSRS----DCHFMHPDRKSPSHTSQPNAVNNSPNGRQKSWFPLTFTMGINDQGEVQVQTQSDA 864
            .:::    :..|:.|:........:|        |::.          |.::|.:|...:.||
Mouse   281 SNQTVLTDESSFLPPEETRFLLPEEP--------GKEL----------IVERGPMQAMNEIDA 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PAN2NP_610427.2 WD40 63..>270 CDD:330360
WD40 repeat 148..183 CDD:293791
WD40 repeat 187..221 CDD:293791
WD40 repeat 227..273 CDD:293791
WD40 repeat 278..314 CDD:293791
UCH_1 505..940 CDD:315986 63/323 (20%)
zf-CCCH_2 799..816 CDD:317060 3/20 (15%)
PAN2_exo 1036..1209 CDD:99846
EqtnNP_081365.2 Afaf 64..245 CDD:291984 40/193 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 110..130 5/25 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 259..283 7/38 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0847
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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