DRSC/TRiP Functional Genomics Resources

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Protein Alignment PAN2 and isg20l2

DIOPT Version :10

Sequence 1:NP_610427.2 Gene:PAN2 / 35893 FlyBaseID:FBgn0033352 Length:1241 Species:Drosophila melanogaster
Sequence 2:NP_001004997.1 Gene:isg20l2 / 448477 XenbaseID:XB-GENE-959111 Length:366 Species:Xenopus tropicalis


Alignment Length:492 Identity:106/492 - (21%)
Similarity:172/492 - (34%) Gaps:165/492 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   759 ILSINCGLN---------NEKDITFLKRQ--LNRCSEKTTVDAAASLSTSKPCRYGANCSRSDCH 812
            :|::|.|.:         |:|...|.||:  |.|          ..|...|.|.           
 Frog     5 LLNLNVGASQPSGKAEYTNKKHERFNKRRKYLER----------KGLLKQKQCP----------- 48

  Fly   813 FMHPDRKSPSHTSQPNAVNNSPNGRQKSWFPLTFTMGINDQGEVQVQTQSDASSGKSEQEEETEK 877
             ..|:|..|         |::|..:.|||                       :.||.|.|:    
 Frog    49 -PRPNRPMP---------NSAPGHQAKSW-----------------------AQGKKEGEQ---- 76

  Fly   878 PPTKGLDNNRMYALHAVVCQVDDGT-----QKNLVSLINVQRPYHTMKL-AESADDPQSQWYIFN 936
                                  .||     :.|......|...:|.... .:....|.....:.|
 Frog    77 ----------------------GGTWNQFNRSNATKSSTVFNGFHQQGAPVKHQGKPVQSNTLIN 119

  Fly   937 DFSISPVSPQESVWFTLDWKVPCILFYRHVEDDSESASTTSSTVTESEETIPSESSSGSPTNLSN 1001
            .||..|                     .|    |.||:......|::....|   .|..|..::.
 Frog   120 HFSSGP---------------------HH----SRSATFMPKETTKAGFKGP---GSSEPARVNG 156

  Fly  1002 PFLEEIVSPMLGNLSADATLQP----LQSDEMPQSGDLVAMDAEFVTLNPEENEIRPDGKTATIK 1062
            ..|...| |:......|:.|..    |.|..:| |...||:|.|.|...       |:|:.:   
 Frog   157 HTLNTKV-PIFPGQPQDSVLNEFDSGLPSSAVP-SRKAVAIDCEMVGTG-------PNGRVS--- 209

  Fly  1063 PCHMSVARISCIRGQGPAEGVPFMDDYISTQEKVVDYLTQFSGIKPGDLDANFSKKRLTALKYSY 1127
                ::||.|.:...|..    ..|.||..:..|.||.|::|||:...|      :..|....:.
 Frog   210 ----NLARCSIVNWFGDV----MYDKYIKPKSPVTDYRTRWSGIRREHL------RNATPFDVAQ 260

  Fly  1128 QKLKYLVDVGVIFVGHGLKNDFRVINIYVPSEQIIDT--VHLFH----MPHHRMVSLRFLAWHFL 1186
            :::..::: |.:.|||.:.||::.:|.:.|.|...||  :.|.:    :|...:.||:.|:...|
 Frog   261 KEILKILN-GKVVVGHAIHNDYKALNYFHPQEMTRDTSKIPLLNRKAGLPEKEVASLKRLSKLLL 324

  Fly  1187 GTKIQ--SETHDSIEDARTTLQLYKHYLKLQEEKKFA 1221
            ...||  |..|.|:|||:||::||: .::::.|::.|
 Frog   325 HKDIQTGSHGHSSVEDAKTTMELYR-VIEVEWERELA 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PAN2NP_610427.2 WD40 63..>270 CDD:475233
WD40 repeat 148..183 CDD:293791
WD40 repeat 187..221 CDD:293791
WD40 repeat 227..273 CDD:293791
WD40 repeat 278..314 CDD:293791
UCH_1 505..940 CDD:463872 33/197 (17%)
zf-CCCH_2 799..816 CDD:464217 1/16 (6%)
PAN2_exo 1036..1209 CDD:99846 51/180 (28%)
isg20l2NP_001004997.1 ISG20 193..349 CDD:99852 51/180 (28%)
Blue background indicates that the domain is not in the aligned region.

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