DRSC/TRiP Functional Genomics Resources

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Protein Alignment PAN2 and Pan2

DIOPT Version :9

Sequence 1:NP_610427.2 Gene:PAN2 / 35893 FlyBaseID:FBgn0033352 Length:1241 Species:Drosophila melanogaster
Sequence 2:NP_001382635.1 Gene:Pan2 / 408200 RGDID:1303301 Length:1207 Species:Rattus norvegicus


Alignment Length:1304 Identity:525/1304 - (40%)
Similarity:724/1304 - (55%) Gaps:207/1304 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 GSAPGNGHFSPSFNGF---------------NIGTTDPE-------------------YVELVPV 54
            |..||...|||:.:..               |: ..|||                   |.||..|
  Rat     5 GLDPGLAEFSPAMHSTLDPVLDAHLNPSLLQNV-ELDPEGVALEALPVQESVHIMEGVYSELHSV 68

  Fly    55 LADGGEHFGVSSVAFDDYEELLWMGNQGGHVTSYYTNSMQKYTSFQVHATDIVRDISTLDSGVLA 119
            :|:.|....||.  ||..||:||:|:.|||.||::..::::|:||||:.:|.:|.|.:|::|:|.
  Rat    69 VAEVGVPVSVSH--FDLQEEMLWVGSHGGHATSFFGPALERYSSFQVNGSDDIRQIQSLENGILF 131

  Fly   120 LTQTSLRHQIRRGLPKFTFKSNNMKEMVSMLQLSPHRLVMAGLQDELIDFDLRTLKETRIEHVGA 184
            ||:.:|::..|.||..|.:..:..::|.|:|....:.|::.|||:.:::.||.|::||:...|..
  Rat   132 LTKNNLKYMARGGLIIFDYLLDESEDMHSLLLADNNTLLVGGLQNHVLEIDLNTVQETQKYAVET 196

  Fly   185 GGCTVLRKNSRYLFAGDQLGTVTLRDLNSLSVQHTIKTHTNILSDFSVQGNLLISCGYSGRQNNL 249
            .|.|::|:.:|:.|.|...|.|:||||.|..|:|.....:..||||.|.||||.:||:|.|...|
  Rat   197 PGVTIMRQTNRFFFCGHTSGKVSLRDLRSFKVEHEFDAFSGSLSDFDVHGNLLAACGFSSRLTGL 261

  Fly   250 AIDRFLMVYDLRMLRLIAPIQVMIDPQMLKFLPSLTSQLAVVSSYGQVQLVDTVELSEPRVSMYQ 314
            |.||||.||||||:|.|.|:||.:||..|:|:|:.||:||::|..||.|..:...|:.| ..::.
  Rat   262 ACDRFLKVYDLRMMRAITPLQVHVDPAFLRFIPTYTSRLAIISQSGQCQFCEPTGLANP-ADIFH 325

  Fly   315 INTNGSQCLSFDISSSSQAMAFGDQSGHINMIAAVQTPQPQFNLYSRSTEFA--DVVPQLPMVSI 377
            :|..|...::||:|:|.||:||||..|.:::  ...:|:|.||.|||.||||  .:|..||.:..
  Rat   326 VNPVGPLLMTFDVSASKQALAFGDSEGCVHL--WTDSPEPSFNPYSRETEFALPCLVDSLPALDW 388

  Fly   378 TDTNFPLSSVMLPHLTTGTQWFSDWPEELLRYRYHRPKTIDPEVLSNMKMQGPIGYSPNPRTARR 442
            :....|||.:.:| |||.. ..||||.........|...:|.|:|..||..|.|||:|||||..|
  Rat   389 SQDLLPLSLIPVP-LTTDA-LLSDWPAANSAPAPRRAPPVDAEILRTMKKVGFIGYAPNPRTRLR 451

  Fly   443 NQIPYVIEQGG---------VCSPNGNGTAAATKAENGVKIIPRRYRKVELKYTKLGTQDFDFDQ 498
            |||||.:::..         ..||.|       :.|..:..:.::||||.:||:|||.:||||..
  Rat   452 NQIPYRLKESDHEFDNFSQVTESPTG-------REEEPLHTVSKKYRKVTIKYSKLGLEDFDFKH 509

  Fly   499 HNQTCFAGLEATLPNSYCNAMLQILYFTDALRVKLLEHSCIKEFCLSCELGFLFNMLDKSTASSP 563
            :|:|.|||||..:||:|||.|:|:|||.:.:|..:..|.|.|||||:|||||||:|||.| ...|
  Rat   510 YNKTLFAGLEPHIPNAYCNCMIQVLYFLEPVRCLIQNHLCQKEFCLACELGFLFHMLDLS-RGDP 573

  Fly   564 CQASNFLRSFRTVPEASALGLILTD---RSSNVNLISLIQNWNRFILHQMHYEIFDSSKNASTYS 625
            ||.|||||:|||:||||||||||.|   .|...:|..|||.||||||.|:|.:: ...:....|.
  Rat   574 CQGSNFLRAFRTIPEASALGLILADSDEASGKGSLARLIQRWNRFILTQLHQDM-QELEVPQAYR 637

  Fly   626 GSVQTSTNAENAGSSETSGSSDLYDSISDENSKEDDRERSKINAETDISKIFGTKQICINRCIKC 690
            |          ||.|....|.   |||                    |.::|..:....:.| :|
  Rat   638 G----------AGGSSFCSSG---DSI--------------------IGQLFSCEMENCSLC-RC 668

  Fly   691 QEEKIKESILLACNLSYP-NHIKD-SDQYFNFGTILKRSLSSEKSIQAFCERCKKFSPTNQSVKV 753
            ..|.::.|..|...|||| ..|.| :.:.::|..:||||:..|::.||:|:.|:|:.||.|:..:
  Rat   669 GSETVRASSTLLFTLSYPEGSICDKTGKNYDFAQVLKRSICLEQNTQAWCDSCEKYQPTIQTRNI 733

  Fly   754 TSLPQILSINCGLNNEKDITFLKRQLNRCSEKTTVDAAASLSTSKPCRYGANCSRSDCHFMHPDR 818
            ..||.||.|||.:|:.|:..|.:.|         .:.|..::..|   :|......:  |...||
  Rat   734 RHLPDILVINCEVNSSKEADFWRLQ---------AEVAFKIAVKK---FGGEVKSKE--FALADR 784

  Fly   819 KSPSHTSQPNAVNNSPNG---------RQKSWFPLTFTM------GIN-----DQGEV-QVQTQS 862
            |.          ..||.|         .:..|.|.:..|      |::     |:.|: .:.|.|
  Rat   785 KE----------LRSPEGFLCCSSMEELKNVWLPFSIRMKMTKNKGLDVCNWADEHELSSLGTPS 839

  Fly   863 DASSGKSEQEEETEKPPTKGLDNNRMYALHAVVCQV-DDGTQKNLVSLINVQRPYHTMKLAESAD 926
            .....::|:|...           .:|.|.|.|..: |..|..:||:.|.|...||..|...:  
  Rat   840 QWGPARAEEEHGV-----------YVYDLMATVVHILDSRTGGSLVAHIKVGETYHQRKEGVT-- 891

  Fly   927 DPQSQWYIFNDFSISPVSPQESVWFTLDWKVPCILFYRHVEDDSESASTTSSTVTESEETIPSES 991
              ..|||:||||.|.|:...|:|.|.::||||.||:|                       :....
  Rat   892 --HQQWYLFNDFLIEPIDKYEAVQFDMNWKVPAILYY-----------------------VKRNL 931

  Fly   992 SSGSPTNLSNPFLEEIVSPMLGNLSADATLQ-----------PLQSDEMPQSGDLVAMDAEFVTL 1045
            :|....|:.||....:       |.|:|:|.           ||..:||||.||||.:|||||||
  Rat   932 NSRYNLNIKNPIEASV-------LLAEASLARKQRKTHTTFIPLMLNEMPQVGDLVGLDAEFVTL 989

  Fly  1046 NPEENEIRPDGKTATIKPCHMSVARISCIRGQGPAEGVPFMDDYISTQEKVVDYLTQFSGIKPGD 1110
            |.||.|:|.||..:||||..||||||:|:|||||.||:||:||||||||:|||||||:|||||||
  Rat   990 NEEEAELRSDGTKSTIKPSQMSVARITCVRGQGPNEGIPFIDDYISTQEQVVDYLTQYSGIKPGD 1054

  Fly  1111 LDANFSKKRLTALKYSYQKLKYLVDVGVIFVGHGLKNDFRVINIYVPSEQIIDTVHLFHMPHHRM 1175
            |||..|.|.||.||.:|.||::|:|:||.||||||:.||||||:.||.:|::|||:|||||..||
  Rat  1055 LDAKISSKHLTTLKSTYLKLRFLIDIGVKFVGHGLQKDFRVINLMVPKDQVLDTVYLFHMPRKRM 1119

  Fly  1176 VSLRFLAWHFLGTKIQSETHDSIEDARTTLQLYKHYLKLQ----EEKKFANALKNLYERGKQLQW 1236
            :|||||||:||..|||.|||||||||||.||||:.||:|.    |.:.|...||.|||:|:::.|
  Rat  1120 ISLRFLAWYFLDLKIQGETHDSIEDARTALQLYRKYLELSKNGAEPESFHKVLKGLYEKGRKMDW 1184

  Fly  1237 KVPE 1240
            ||||
  Rat  1185 KVPE 1188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PAN2NP_610427.2 WD40 63..>270 CDD:330360 88/206 (43%)
WD40 repeat 148..183 CDD:293791 11/34 (32%)
WD40 repeat 187..221 CDD:293791 14/33 (42%)
WD40 repeat 227..273 CDD:293791 30/45 (67%)
WD40 repeat 278..314 CDD:293791 13/35 (37%)
UCH_1 505..940 CDD:315986 155/461 (34%)
zf-CCCH_2 799..816 CDD:317060 2/16 (13%)
PAN2_exo 1036..1209 CDD:99846 124/172 (72%)
Pan2NP_001382635.1 WD 1. /evidence=ECO:0000255|HAMAP-Rule:MF_03182 153..193 12/39 (31%)
WD 2. /evidence=ECO:0000255|HAMAP-Rule:MF_03182 195..231 14/35 (40%)
WD 3. /evidence=ECO:0000255|HAMAP-Rule:MF_03182 244..280 23/35 (66%)
WD 4. /evidence=ECO:0000255|HAMAP-Rule:MF_03182 328..367 15/40 (38%)
Linker. /evidence=ECO:0000255|HAMAP-Rule:MF_03182 368..484 46/124 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166346551
Domainoid 1 1.000 345 1.000 Domainoid score I1020
eggNOG 1 0.900 - - E1_COG0847
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5918
Inparanoid 1 1.050 866 1.000 Inparanoid score I398
OMA 1 1.010 - - QHG55598
OrthoDB 1 1.010 - - D128953at2759
OrthoFinder 1 1.000 - - FOG0004707
OrthoInspector 1 1.000 - - oto95635
orthoMCL 1 0.900 - - OOG6_102772
Panther 1 1.100 - - LDO PTHR15728
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3880
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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