Sequence 1: | NP_610427.2 | Gene: | PAN2 / 35893 | FlyBaseID: | FBgn0033352 | Length: | 1241 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001382635.1 | Gene: | Pan2 / 408200 | RGDID: | 1303301 | Length: | 1207 | Species: | Rattus norvegicus |
Alignment Length: | 1304 | Identity: | 525/1304 - (40%) |
---|---|---|---|
Similarity: | 724/1304 - (55%) | Gaps: | 207/1304 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 24 GSAPGNGHFSPSFNGF---------------NIGTTDPE-------------------YVELVPV 54
Fly 55 LADGGEHFGVSSVAFDDYEELLWMGNQGGHVTSYYTNSMQKYTSFQVHATDIVRDISTLDSGVLA 119
Fly 120 LTQTSLRHQIRRGLPKFTFKSNNMKEMVSMLQLSPHRLVMAGLQDELIDFDLRTLKETRIEHVGA 184
Fly 185 GGCTVLRKNSRYLFAGDQLGTVTLRDLNSLSVQHTIKTHTNILSDFSVQGNLLISCGYSGRQNNL 249
Fly 250 AIDRFLMVYDLRMLRLIAPIQVMIDPQMLKFLPSLTSQLAVVSSYGQVQLVDTVELSEPRVSMYQ 314
Fly 315 INTNGSQCLSFDISSSSQAMAFGDQSGHINMIAAVQTPQPQFNLYSRSTEFA--DVVPQLPMVSI 377
Fly 378 TDTNFPLSSVMLPHLTTGTQWFSDWPEELLRYRYHRPKTIDPEVLSNMKMQGPIGYSPNPRTARR 442
Fly 443 NQIPYVIEQGG---------VCSPNGNGTAAATKAENGVKIIPRRYRKVELKYTKLGTQDFDFDQ 498
Fly 499 HNQTCFAGLEATLPNSYCNAMLQILYFTDALRVKLLEHSCIKEFCLSCELGFLFNMLDKSTASSP 563
Fly 564 CQASNFLRSFRTVPEASALGLILTD---RSSNVNLISLIQNWNRFILHQMHYEIFDSSKNASTYS 625
Fly 626 GSVQTSTNAENAGSSETSGSSDLYDSISDENSKEDDRERSKINAETDISKIFGTKQICINRCIKC 690
Fly 691 QEEKIKESILLACNLSYP-NHIKD-SDQYFNFGTILKRSLSSEKSIQAFCERCKKFSPTNQSVKV 753
Fly 754 TSLPQILSINCGLNNEKDITFLKRQLNRCSEKTTVDAAASLSTSKPCRYGANCSRSDCHFMHPDR 818
Fly 819 KSPSHTSQPNAVNNSPNG---------RQKSWFPLTFTM------GIN-----DQGEV-QVQTQS 862
Fly 863 DASSGKSEQEEETEKPPTKGLDNNRMYALHAVVCQV-DDGTQKNLVSLINVQRPYHTMKLAESAD 926
Fly 927 DPQSQWYIFNDFSISPVSPQESVWFTLDWKVPCILFYRHVEDDSESASTTSSTVTESEETIPSES 991
Fly 992 SSGSPTNLSNPFLEEIVSPMLGNLSADATLQ-----------PLQSDEMPQSGDLVAMDAEFVTL 1045
Fly 1046 NPEENEIRPDGKTATIKPCHMSVARISCIRGQGPAEGVPFMDDYISTQEKVVDYLTQFSGIKPGD 1110
Fly 1111 LDANFSKKRLTALKYSYQKLKYLVDVGVIFVGHGLKNDFRVINIYVPSEQIIDTVHLFHMPHHRM 1175
Fly 1176 VSLRFLAWHFLGTKIQSETHDSIEDARTTLQLYKHYLKLQ----EEKKFANALKNLYERGKQLQW 1236
Fly 1237 KVPE 1240 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
PAN2 | NP_610427.2 | WD40 | 63..>270 | CDD:330360 | 88/206 (43%) |
WD40 repeat | 148..183 | CDD:293791 | 11/34 (32%) | ||
WD40 repeat | 187..221 | CDD:293791 | 14/33 (42%) | ||
WD40 repeat | 227..273 | CDD:293791 | 30/45 (67%) | ||
WD40 repeat | 278..314 | CDD:293791 | 13/35 (37%) | ||
UCH_1 | 505..940 | CDD:315986 | 155/461 (34%) | ||
zf-CCCH_2 | 799..816 | CDD:317060 | 2/16 (13%) | ||
PAN2_exo | 1036..1209 | CDD:99846 | 124/172 (72%) | ||
Pan2 | NP_001382635.1 | WD 1. /evidence=ECO:0000255|HAMAP-Rule:MF_03182 | 153..193 | 12/39 (31%) | |
WD 2. /evidence=ECO:0000255|HAMAP-Rule:MF_03182 | 195..231 | 14/35 (40%) | |||
WD 3. /evidence=ECO:0000255|HAMAP-Rule:MF_03182 | 244..280 | 23/35 (66%) | |||
WD 4. /evidence=ECO:0000255|HAMAP-Rule:MF_03182 | 328..367 | 15/40 (38%) | |||
Linker. /evidence=ECO:0000255|HAMAP-Rule:MF_03182 | 368..484 | 46/124 (37%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166346551 | |
Domainoid | 1 | 1.000 | 345 | 1.000 | Domainoid score | I1020 |
eggNOG | 1 | 0.900 | - | - | E1_COG0847 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H5918 | |
Inparanoid | 1 | 1.050 | 866 | 1.000 | Inparanoid score | I398 |
OMA | 1 | 1.010 | - | - | QHG55598 | |
OrthoDB | 1 | 1.010 | - | - | D128953at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0004707 | |
OrthoInspector | 1 | 1.000 | - | - | oto95635 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_102772 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR15728 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X3880 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
16 | 15.770 |