DRSC/TRiP Functional Genomics Resources

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Protein Alignment PAN2 and Isg20l2

DIOPT Version :10

Sequence 1:NP_610427.2 Gene:PAN2 / 35893 FlyBaseID:FBgn0033352 Length:1241 Species:Drosophila melanogaster
Sequence 2:NP_808331.1 Gene:Isg20l2 / 229504 MGIID:2140076 Length:368 Species:Mus musculus


Alignment Length:365 Identity:79/365 - (21%)
Similarity:132/365 - (36%) Gaps:101/365 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   877 KPPTKGLDNNRMYALHAVVCQVDDGTQKNLVSLINVQRPYHTMKLAESADDPQSQWYIFNDFSIS 941
            :||.|| :.:|:           ||..|.|..      |......|...|..||:         .
Mouse    56 EPPKKG-ETSRV-----------DGILKILPC------PKKKEAAASKRDSEQSK---------D 93

  Fly   942 PVSPQESVWFTLDWKVPCILFYRHVEDDSESASTTS--STVTESEETIPSESSSGSPTNLSNPFL 1004
            ..:|       |.|..|.        ...::||..|  ..:.|.:..:|...|:....:......
Mouse    94 KKAP-------LSWLTPA--------PSKKTASVVSKIDLLGEFQSALPKTKSTQKKGSKKKSLK 143

  Fly  1005 EEIV---SPMLGNLSADATLQPLQSDEMPQS-----------------GDLVAMDAEFVTLNPEE 1049
            ::|.   |....:....:..:||:.:.:|.|                 |.:||:|.|.|...|: 
Mouse   144 KKIATENSTQAQSKDKGSKKKPLKKNAVPNSTQARSEDKCPTVPQNLPGKMVAIDCEMVGTGPK- 207

  Fly  1050 NEIRPDGKTATIKPCHMSVARISCIRGQGPAEGVPFMDDYISTQEKVVDYLTQFSGIKPGDL--D 1112
                  |:.:       |:||.|.:...|..    ..|:|:.....:|:|.|::|||:...:  .
Mouse   208 ------GRVS-------SLARCSIVNYNGDV----LYDEYVLPPCYIVNYRTRWSGIRKCHMVNA 255

  Fly  1113 ANFSKKRLTALKYSYQKLKYLVDVGVIFVGHGLKNDFRVINIYVPSEQIIDTVHL------FHMP 1171
            ..|...|...||         :..|.:.:||.:.||::.:..:.|.....||..:      ...|
Mouse   256 TPFKTARSQILK---------ILSGKVVIGHAIHNDYKALQYFHPKSLTRDTSRIPLLNRKADCP 311

  Fly  1172 HHRMVSLRFLAWHFLGTKIQ--SETHDSIEDARTTLQLYK 1209
            .:..:||:.|....|...||  :..|.|:|||:.|::|||
Mouse   312 ENVTLSLKHLTKKLLSRDIQVGNTGHSSVEDAQATMELYK 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PAN2NP_610427.2 WD40 63..>270 CDD:475233
WD40 repeat 148..183 CDD:293791
WD40 repeat 187..221 CDD:293791
WD40 repeat 227..273 CDD:293791
WD40 repeat 278..314 CDD:293791
UCH_1 505..940 CDD:463872 14/62 (23%)
zf-CCCH_2 799..816 CDD:464217
PAN2_exo 1036..1209 CDD:99846 46/182 (25%)
Isg20l2NP_808331.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 33..107 18/92 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 127..187 8/59 (14%)
ISG20 195..351 CDD:99852 46/182 (25%)
Blue background indicates that the domain is not in the aligned region.

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