DRSC/TRiP Functional Genomics Resources

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Protein Alignment PAN2 and pqe-1

DIOPT Version :9

Sequence 1:NP_610427.2 Gene:PAN2 / 35893 FlyBaseID:FBgn0033352 Length:1241 Species:Drosophila melanogaster
Sequence 2:NP_498135.2 Gene:pqe-1 / 175731 WormBaseID:WBGene00004095 Length:1647 Species:Caenorhabditis elegans


Alignment Length:784 Identity:137/784 - (17%)
Similarity:255/784 - (32%) Gaps:286/784 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   618 SKNASTYSGSVQTSTNAENAGSSETSGSSDLYDSISDE---------NSKEDDRERSKINAETDI 673
            |::..|.|.|:.:||.:....|.||..|   |:.|..:         .::|::|||.::   ..:
 Worm   974 SRDTPTASSSMSSSTLSYCKKSKETPMS---YEEIEQQKKAKRQRNCKTREENRERKRL---AQL 1032

  Fly   674 SKIFGTKQICINRCIKCQEEKIKESILLACNLSYPNHIKDSDQYFNFGTILKRSLSSEKSIQAFC 738
            .::..::...:.|.::..::                   :||.       |..||::  :|:.|.
 Worm  1033 EELESSETTGVRRTLRSTQD-------------------NSDP-------LDASLAT--TIEEFR 1069

  Fly   739 ERCKKFSPTNQSVKVTSLPQILSINCGLNNEKDITFLKRQLNRCSEKTTVDAAASLSTSKPCRYG 803
            :..||.:.::::               ...||.....||..:..|..:..|     ....|.:..
 Worm  1070 KTKKKDAKSSEN---------------RAKEKQKPMNKRPTSSASVDSNDD-----GVHIPAKRM 1114

  Fly   804 ANCSRSDCHFMHPDRKSPSHTSQP--NAVNNSPNGRQKSWFPLTFTMGINDQGEVQVQTQSDASS 866
            |:.|         ....||.:..|  .||.|.||..:                      ..|..:
 Worm  1115 AHAS---------SVPGPSRSKPPMIGAVKNRPNHTE----------------------MLDKRN 1148

  Fly   867 GKSEQEEETEKPPTKGLDNNRMYALHAVVCQVDDGTQKNLVSLINVQRPYHTMKLAESADDPQSQ 931
            .:||::...::...:.|.|.:    |.        |::..:.:..:|   :.:|:...|...::.
 Worm  1149 KESEEKRRKDRDELERLRNKK----HT--------TEEEKIKMARLQ---NALKVVGKAAGLKAT 1198

  Fly   932 WYIFNDFSISPV---SPQESVWFTLDWKVP-----------CILFYRHVEDDSESAS-------- 974
              :..:.:.||.   .|..:|...||:.|.           .::|...:|.||.:|:        
 Worm  1199 --VKKELTGSPAKKQKPAPAVPKILDFSVGRTFTAIRQTAIKLVFDTFLERDSPNAAREAQEFEL 1261

  Fly   975 --------------------------TTSSTVTESEETI---------PSES---SSGSPTNLSN 1001
                                      .||..:..::..:         |.::   :.|..|::.:
 Worm  1262 SIAKQYTDGQKYRINIGHKVAALRKENTSGILEVNKNAVSHDKILAGGPKDNCTVARGRKTHVDH 1326

  Fly  1002 PFLE-EIVSPMLGNLSADATLQPLQSDEMPQSGD----LVAMDAEFVTLNP-------------- 1047
            ..|. |.:.|:|  |....|...|:::..|...|    .|::.....|.|.              
 Worm  1327 RQLSIEKLHPLL--LQFKLTTSELETNAYPMRRDGSTKAVSIADTVYTQNKKMFLDDYDMSRNCS 1389

  Fly  1048 ---EENEIRPDG----KTATIKPCHMSVA----------RISCIRGQ-GPAEGVPFMDDYISTQ- 1093
               :|.::.|:|    .|...:..:..||          |.||...: ..|.|..|.|.:::.| 
 Worm  1390 RCNKEFKLSPNGTMIRSTGICRYHNRGVAINGKRDTFRKRYSCCNEEFNVALGCKFSDVHVTDQL 1454

  Fly  1094 -------------------------------------------------------------EKVV 1097
                                                                         ..|:
 Worm  1455 FKKELSTFVSTPVPVPNDQRSTRVYALDCEMVYTIAGPALARLTMVDMQRNRVLDVFVKPPTDVL 1519

  Fly  1098 DYLTQFSGIKPGDLDANFSKKRLTALKYSYQKLKYLVDVGVIFVGHGLKNDFRVINIYVPSEQII 1162
            |..|:|||:....:::     ....||..:|||...|:...|.:||.|::|.:.:.  |..:.:|
 Worm  1520 DPNTEFSGLTMEQINS-----APDTLKTCHQKLFKYVNADTILIGHSLESDLKAMR--VVHKNVI 1577

  Fly  1163 DTVHLFHMPHHRMVSLRFLAWHFLGTKIQSET-----HDSIEDARTTLQLYKHYLKLQEEKKFAN 1222
            ||..||.......|:|:.|:...|...||.:.     |||:|||.|.:.|..:.|:..|......
 Worm  1578 DTAILFRSTRDTKVALKVLSAKLLHKNIQGDNEDAIGHDSMEDALTCVDLIFYGLRNPESIAIRE 1642

  Fly  1223 ALKN 1226
            |..|
 Worm  1643 ANTN 1646

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PAN2NP_610427.2 WD40 63..>270 CDD:330360
WD40 repeat 148..183 CDD:293791
WD40 repeat 187..221 CDD:293791
WD40 repeat 227..273 CDD:293791
WD40 repeat 278..314 CDD:293791
UCH_1 505..940 CDD:315986 53/332 (16%)
zf-CCCH_2 799..816 CDD:317060 3/16 (19%)
PAN2_exo 1036..1209 CDD:99846 54/271 (20%)
pqe-1NP_498135.2 PHA03160 <285..405 CDD:165431
Amelogenin <377..502 CDD:197891
EloA-BP1 1230..1364 CDD:292495 19/135 (14%)
REX1_like 1479..1629 CDD:99848 37/156 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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