DRSC/TRiP Functional Genomics Resources

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Protein Alignment AIMP1 and AT3G59980

DIOPT Version :10

Sequence 1:NP_610426.2 Gene:AIMP1 / 35892 FlyBaseID:FBgn0033351 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_191557.1 Gene:AT3G59980 / 825168 AraportID:AT3G59980 Length:273 Species:Arabidopsis thaliana


Alignment Length:214 Identity:85/214 - (39%)
Similarity:117/214 - (54%) Gaps:17/214 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 PAEAGPATAAPAAPAPKPAKEPKEKKSKEKKPAAEKPAAAPEAPVDVGRLDLRVGKIVEVGRHPD 181
            |..|...||||.|.....|.|.::|...:|:....|..|        ..||::||:||:..:|.:
plant    68 PRVATFCTAAPDAGTTVSADESEKKSESQKEEENVKETA--------NLLDIKVGRIVKAWQHEE 124

  Fly   182 ADSLYLEKIDCGEAAPRTVVSGLVKFVPLEEMQNRLVVVMCNLKPAKMRGVTSEAMVMCAS--TP 244
            |||||:|::|.|||.||.:.|||||:|||:.:|...|||:.||||..||||.|..|::.||  ..
plant   125 ADSLYVEEVDIGEAEPRIICSGLVKYVPLDLLQGASVVVLANLKPRNMRGVKSCGMLLAASDAAH 189

  Fly   245 EKVEVLSPPAGAVPGDLV------HCEGYPRQPDAQLNPKKKIFESCAPDLKTNGELVACYKGAA 303
            |.||:|.||.|:||||.|      ..|..|.........|||::|...|.|||:...|:..|...
plant   190 ENVELLVPPEGSVPGDRVWFGNEEDLEQLPEPAPPNKVQKKKMWELVQPLLKTDASGVSMLKEHL 254

  Fly   304 LHVPGKGNVVAQTLKNVNV 322
            :.. ..|.|.:::|:|.|:
plant   255 MRT-SSGLVTSKSLRNANI 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AIMP1NP_610426.2 DUF2968 <23..91 CDD:431707
PLN02610 <161..304 CDD:215329 67/150 (45%)
AT3G59980NP_191557.1 tRNA_bind_EMAP-II_like 104..208 CDD:239198 55/111 (50%)
Blue background indicates that the domain is not in the aligned region.

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