DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AIMP1 and aimp1

DIOPT Version :9

Sequence 1:NP_610426.2 Gene:AIMP1 / 35892 FlyBaseID:FBgn0033351 Length:323 Species:Drosophila melanogaster
Sequence 2:XP_012818679.2 Gene:aimp1 / 549804 XenbaseID:XB-GENE-958442 Length:313 Species:Xenopus tropicalis


Alignment Length:314 Identity:149/314 - (47%)
Similarity:211/314 - (67%) Gaps:13/314 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 QNCSKFARNKRTMADLQQIASNNERAEALINSIEAEISGIQQQLV----ERQKQELIKENAALAK 78
            ::.:|.|.:...:..|.|.|:   .|:.:|..::.:::.::::.:    .|::::|..|||.|.|
 Frog     5 RSVTKMATSNPVINRLDQRAA---EADQIIEYLKQQVALLKEKAILQASLREEKKLRVENAKLKK 66

  Fly    79 EVEAALAQLVQLELRNGKKQIPVPGARGFCTSAAPVVMPAEAGPATAAPAAPAPKPAKEPKEKKS 143
            |:|....|||:.|::||.|||.:|.:....:|.:..|...:..|..::|  ||||..:|.|:|:.
 Frog    67 EIETLKEQLVKTEVKNGVKQIGIPASTSADSSPSIPVSAPQPPPVKSSP--PAPKSGEEKKKKEK 129

  Fly   144 KEKK--PAAEKPAAAPE--APVDVGRLDLRVGKIVEVGRHPDADSLYLEKIDCGEAAPRTVVSGL 204
            .|||  ...:||||:.:  ..|||.|||||||.||...:||||||||:|::|.|||.||||||||
 Frog   130 PEKKGEKKEKKPAASEDEIKAVDVSRLDLRVGCIVTAKKHPDADSLYVEEVDVGEATPRTVVSGL 194

  Fly   205 VKFVPLEEMQNRLVVVMCNLKPAKMRGVTSEAMVMCASTPEKVEVLSPPAGAVPGDLVHCEGYPR 269
            ||.:|||:||||:.|::||||||||||:.|:|||||||:|||||:|.||:||||||.:..:|||.
 Frog   195 VKHIPLEQMQNRMAVLLCNLKPAKMRGILSQAMVMCASSPEKVEILDPPSGAVPGDRITFQGYPG 259

  Fly   270 QPDAQLNPKKKIFESCAPDLKTNGELVACYKGAALHVPGKGNVVAQTLKNVNVK 323
            :||.:||||||.:|...|||.||.:.||.|||....|.|||...|||:.:..:|
 Frog   260 EPDKELNPKKKTWEQIQPDLLTNDKCVATYKGVPFEVQGKGVCKAQTMTSSGIK 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AIMP1NP_610426.2 tRNA_bind_EMAP-II_like 161..262 CDD:239198 75/100 (75%)
aimp1XP_012818679.2 alaS <31..87 CDD:234701 17/55 (31%)
PLN02610 <142..313 CDD:215329 106/170 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 150 1.000 Domainoid score I4367
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H31260
Inparanoid 1 1.050 275 1.000 Inparanoid score I2892
OMA 1 1.010 - - QHG56436
OrthoDB 1 1.010 - - D1434247at2759
OrthoFinder 1 1.000 - - FOG0000771
OrthoInspector 1 1.000 - - oto102886
Panther 1 1.100 - - LDO PTHR11586
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1946
SonicParanoid 1 1.000 - - X2386
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

Return to query results.
Submit another query.