DRSC/TRiP Functional Genomics Resources

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Protein Alignment AIMP1 and MARS1

DIOPT Version :9

Sequence 1:NP_610426.2 Gene:AIMP1 / 35892 FlyBaseID:FBgn0033351 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_004981.2 Gene:MARS1 / 4141 HGNCID:6898 Length:900 Species:Homo sapiens


Alignment Length:116 Identity:30/116 - (25%)
Similarity:42/116 - (36%) Gaps:50/116 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 TMADLQQIASNNERAEALINSIEAEISGIQQQLVERQKQELIKENAALAKEVEAALAQLVQLELR 93
            |.|..|||       :||::.:..     |..:|...|.:...:|     ||.|.:|:|:.|   
Human   835 TTAKPQQI-------QALMDEVTK-----QGNIVRELKAQKADKN-----EVAAEVAKLLDL--- 879

  Fly    94 NGKKQIPVPGARGFCTSAAPVVMPAEAGPATAAPAAPAPKPAKEPKEKKSK 144
              |||:.|  |.|                          ||.:.||.||.|
Human   880 --KKQLAV--AEG--------------------------KPPEAPKGKKKK 900

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AIMP1NP_610426.2 tRNA_bind_EMAP-II_like 161..262 CDD:239198
MARS1NP_004981.2 Thioredoxin_like <27..68 CDD:294274
GstA <47..189 CDD:223698
GST_C_MetRS_N 77..179 CDD:198340
PRK12268 264..819 CDD:237029
MetRS_core 265..633 CDD:173907
'HIGH' region 273..283
'KMSKS' region 593..597
Anticodon_Ia_Met 642..771 CDD:153411
MetRS_RNA 845..889 CDD:238475 17/86 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0143
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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