DRSC/TRiP Functional Genomics Resources

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Protein Alignment AIMP1 and yars1

DIOPT Version :10

Sequence 1:NP_610426.2 Gene:AIMP1 / 35892 FlyBaseID:FBgn0033351 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_958473.1 Gene:yars1 / 368235 ZFINID:ZDB-GENE-030425-2 Length:529 Species:Danio rerio


Alignment Length:322 Identity:123/322 - (38%)
Similarity:172/322 - (53%) Gaps:48/322 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 LINSIEAEISGIQQQLVERQ-KQELIKENAALAKEVEAALAQLVQLELRNGK------------- 96
            |:|.:...::|.:....|.: |.:|:.:|..:.|:::.|..:...:| .||.             
Zfish   210 LMNPMVPGLTGSKMSSSEEESKIDLLDKNQDVKKKLKKAFCEPGNVE-NNGVLSFVKHVLFPLHS 273

  Fly    97 ----KQIPVPGARGFCTS--------AAPVVMPAEAGPATAAPAA-----PAPKPAKEPKEKK-- 142
                |:.|..|.....|.        ||..:.|.:. .|:...|.     |..|..:.|:.||  
Zfish   274 EFVIKRDPKFGGDKVYTDFEEVEKDFAAEQIHPGDL-KASVELALNKLLDPIRKKFESPELKKLT 337

  Fly   143 -SKEKKPAAEKPAAA--PEAPVD-----VGRLDLRVGKIVEVGRHPDADSLYLEKIDCGEAAPRT 199
             |...:|:..|..|.  |:...|     ..|||:||||::.|.:|||||||||||||.||..|||
Zfish   338 SSAYPEPSKNKGGAKGNPKQTTDDDEVIPSRLDIRVGKVISVEKHPDADSLYLEKIDVGEEQPRT 402

  Fly   200 VVSGLVKFVPLEEMQNRLVVVMCNLKPAKMRGVTSEAMVMCAS---TPEKVEVLSPPAGAVPGDL 261
            ||||||.::..|::|:||||::|||||.||||:.|:|||:|||   .|.|||.|.||.|:..||.
Zfish   403 VVSGLVAYITEEQLQDRLVVLLCNLKPQKMRGIESQAMVLCASIEGEPRKVEPLDPPEGSAAGDR 467

  Fly   262 VHCEGYPR-QPDAQLNPKKKIFESCAPDLKTNGELVACYKGAALHVPGKGNVVAQTLKNVNV 322
            |:.|||.. :||.:|.||||:||....|||.:||.||.:|...| :...|.:..:|||..|:
Zfish   468 VYVEGYESGKPDDELKPKKKVFEKLQVDLKISGEFVAQWKEQNL-MTKLGRITCKTLKGGNI 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AIMP1NP_610426.2 DUF2968 <23..91 CDD:431707 9/45 (20%)
PLN02610 <161..304 CDD:215329 86/151 (57%)
yars1NP_958473.1 nt_trans 8..336 CDD:469580 25/127 (20%)
'HIGH' region. /evidence=ECO:0000250|UniProtKB:P54577 44..52
'KMSKS' region. /evidence=ECO:0000250|UniProtKB:P54577 222..226 0/3 (0%)
Nuclear localization signal. /evidence=ECO:0000250|UniProtKB:P54577 242..247 1/4 (25%)
PLN02610 <293..529 CDD:215329 107/238 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 335..362 7/26 (27%)
Blue background indicates that the domain is not in the aligned region.

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