DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment AIMP1 and mars1

DIOPT Version :9

Sequence 1:	NP_610426.2	Gene:	AIMP1 / 35892	FlyBaseID:	FBgn0033351	Length:	323	Species:	Drosophila melanogaster
Sequence 2:	NP_956370.1	Gene:	mars1 / 338183	ZFINID:	ZDB-GENE-030219-83	Length:	922	Species:	Danio rerio

Alignment Length:	172	Identity:	45/172 - (26%)
Similarity:	67/172 - (38%)	Gaps:	33/172 - (19%)

- Green bases have known domain annotations that are detailed below.

  Fly    30 MADLQQIASNNERAEALINSIEAEISGIQQQLVERQKQELIKENAALAKEV-EAALAQLV-QLEL 92
            :..||.:|...:|.||.. .::..:|.::|.|.:|:...|..|..::|..| .|||..|: ....
Zfish    95 LQSLQLVALQGKRVEAAA-VMKEPLSWLEQSLSKRKTSFLTDEVVSVADVVLWAALYPLLSDSAF 158

  Fly    93 RNGKKQIPVPGARGF---------CTSAAPVVMP---AEA-------GPATAAPAAPAPKPAKEP 138
            ..|..|    ..||:         |.|||..|:.   |||       .|.|..|...:|..:.|
Zfish   159 EPGDLQ----AVRGWFERVCSVSACQSAALRVLQGKGAEALKSFLQKQPVTHTPRRDSPSNSTE- 218

  Fly   139 KEKKSKEKKPAAEKPAAAPEAPVDVGRLDLRVGKIVEVGRHP 180
            .|...:|..|...:.||      .|....|:...:|...:||
Zfish   219 AEDSERELSPEEIEEAA------QVYSEGLKDFTVVTERKHP 254

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
AIMP1	NP_610426.2	tRNA_bind_EMAP-II_like	161..262	CDD:239198	5/20 (25%)
mars1	NP_956370.1	GstA	1..173	CDD:223698	22/82 (27%)
		GST_N_family	1..67	CDD:238319
		GST_C_MetRS_N	75..176	CDD:198340	22/85 (26%)
		PRK12268	261..820	CDD:237029
		MetRS_core	263..631	CDD:173907
		Anticodon_Ia_Met	640..769	CDD:153411
		MetRS_RNA	866..910	CDD:238475
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0143
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.900