DRSC/TRiP Functional Genomics Resources

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Protein Alignment AIMP1 and Aimp1

DIOPT Version :9

Sequence 1:NP_610426.2 Gene:AIMP1 / 35892 FlyBaseID:FBgn0033351 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_031952.2 Gene:Aimp1 / 13722 MGIID:102774 Length:319 Species:Mus musculus


Alignment Length:327 Identity:149/327 - (45%)
Similarity:205/327 - (62%) Gaps:27/327 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 CKNYGQNCSKFARNKRTMADLQQIASNNERAEALINSIEAEISGIQQ----QLVERQKQELIKEN 73
            |:.:|    |.|.|...:..|:|   ....|:.:|..::.:::.:::    |...|::::|..||
Mouse     4 CRFWG----KMATNDAVLKRLEQ---KGAEADQIIEYLKQQVALLKEKAILQATMREEKKLRVEN 61

  Fly    74 AALAKEVEAALAQLVQLELRNGKKQIPV---PGARGFCTSAAPVVMPAEAGPATAAPAAPA---- 131
            |.|.||:|....:|:..|:.||.:|:.|   ...:..||::..||.    .|:.|..|:||    
Mouse    62 AKLKKEIEELKQELILAEIHNGVEQVRVRLSTPLQTNCTASESVVQ----SPSVATTASPATKEQ 122

  Fly   132 -----PKPAKEPKEKKSKEKKPAAEKPAAAPEAPVDVGRLDLRVGKIVEVGRHPDADSLYLEKID 191
                 .|..||..|||.::|:......|:....|:|..|||||:|.||...:||||||||:|::|
Mouse   123 IKAGEEKKVKEKTEKKGEKKEKQQSAAASTDSKPIDASRLDLRIGCIVTAKKHPDADSLYVEEVD 187

  Fly   192 CGEAAPRTVVSGLVKFVPLEEMQNRLVVVMCNLKPAKMRGVTSEAMVMCASTPEKVEVLSPPAGA 256
            .|||||||||||||..||||:||||:||::|||||||||||.|:|||||||:|||||:|:||.|:
Mouse   188 VGEAAPRTVVSGLVNHVPLEQMQNRMVVLLCNLKPAKMRGVLSQAMVMCASSPEKVEILAPPNGS 252

  Fly   257 VPGDLVHCEGYPRQPDAQLNPKKKIFESCAPDLKTNGELVACYKGAALHVPGKGNVVAQTLKNVN 321
            ||||.:..:.:|.:||.:|||||||:|...|||.||.|.||.||||...|.|||...|||:.|..
Mouse   253 VPGDRITFDAFPGEPDKELNPKKKIWEQIQPDLHTNAECVATYKGAPFEVKGKGVCRAQTMANSG 317

  Fly   322 VK 323
            :|
Mouse   318 IK 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AIMP1NP_610426.2 tRNA_bind_EMAP-II_like 161..262 CDD:239198 74/100 (74%)
Aimp1NP_031952.2 NUDE_C 17..>117 CDD:282704 27/106 (25%)
tRNA_bind_EMAP-II_like 157..259 CDD:239198 74/101 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847200
Domainoid 1 1.000 150 1.000 Domainoid score I4383
eggNOG 1 0.900 - - E1_COG0143
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H31260
Inparanoid 1 1.050 266 1.000 Inparanoid score I3033
Isobase 1 0.950 - 1 Normalized mean entropy S1526
OMA 1 1.010 - - QHG56436
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000771
OrthoInspector 1 1.000 - - oto92590
orthoMCL 1 0.900 - - OOG6_100893
Panther 1 1.100 - - LDO PTHR11586
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1946
SonicParanoid 1 1.000 - - X2386
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.740

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