DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8237 and Fam8a1

DIOPT Version :9

Sequence 1:NP_610425.1 Gene:CG8237 / 35891 FlyBaseID:FBgn0033350 Length:325 Species:Drosophila melanogaster
Sequence 2:NP_001292104.1 Gene:Fam8a1 / 291031 RGDID:1307845 Length:384 Species:Rattus norvegicus


Alignment Length:361 Identity:95/361 - (26%)
Similarity:143/361 - (39%) Gaps:99/361 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ETGQKLTE-----------RSTKEAYFESLAEWAKQATLAQNAMLMFPYYLMANYPTMFPGL--- 57
            |||.:..|           |.:...|...:.||..|:              ...|.|...||   
  Rat    66 ETGAEPQEPGGCEASDGPGRLSAREYSRQVHEWLWQS--------------YCGYLTWHSGLAAL 116

  Fly    58 -----PSSAALQAAAMGQPQALVQ---------GSAAAPGEPAAEPRLPAPNFSGLRILGEAAQL 108
                 |..||.|.||...|....|         .||||||..||......|.    .:.|..|:.
  Rat   117 PAYCGPPPAAPQPAAPPPPPPPPQLAYYNPFYFLSAAAPGPGAATSAGATPT----AVAGLTARA 177

  Fly   109 DIIQ------------------------RLGGYEYVLSPFWKRAVAETIDMFILFIVKIIITFGV 149
            ..:|                        |..|.|||:.....|.:||.:|.||||.:|..|...:
  Rat   178 PHVQASARAVPVTRVGSAAPARTASDTGRQAGREYVIPSLAHRFMAEMVDFFILFFIKATIVLSI 242

  Fly   150 VNLFNI----EFDEDVIRRTLDQEDLFSNFFDTSLDFISMSTDLLLIEMLTKFIVCCYEALWTYL 210
            ::|..|    :|....|...:|:        |||::.:.   .::::.::.:.:||.||.:..:.
  Rat   243 MHLSGIKDISKFAMHYIIEEIDE--------DTSMEDLQ---KMMIVALIYRLLVCFYEIICIWG 296

  Fly   211 YQGATPGKSLMKIRIYYVEAVMPLQGPPLPQFVLQPQREPMRALLYPPQTPSLMRSFARALIKNL 275
            ..||||||.|:.:|:...:..:.:              .|.|.|:.|....|:..|..||||||.
  Rat   297 AGGATPGKFLLGLRVVTCDTSVLI--------------APSRVLVIPSSNVSITTSTIRALIKNF 347

  Fly   276 GMTLLFPICVLMVFFKNNRTAYDVLTKTIVVESNSI 311
            .:...||..:.::||::||||||::..||||:.|.:
  Rat   348 SIASFFPAFITLLFFQHNRTAYDIVAGTIVVKRNGV 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8237NP_610425.1 RDD 123..302 CDD:294483 52/182 (29%)
Fam8a1NP_001292104.1 RDD 215..374 CDD:283845 52/183 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340690
Domainoid 1 1.000 49 1.000 Domainoid score I11509
eggNOG 1 0.900 - - E1_KOG4647
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 103 1.000 Inparanoid score I4860
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1123503at2759
OrthoFinder 1 1.000 - - FOG0005417
OrthoInspector 1 1.000 - - oto98849
orthoMCL 1 0.900 - - OOG6_107529
Panther 1 1.100 - - LDO PTHR13659
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.760

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