DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8243 and Smap1

DIOPT Version :9

Sequence 1:NP_610424.1 Gene:CG8243 / 35890 FlyBaseID:FBgn0033349 Length:517 Species:Drosophila melanogaster
Sequence 2:NP_001344324.1 Gene:Smap1 / 98366 MGIID:2138261 Length:467 Species:Mus musculus


Alignment Length:546 Identity:191/546 - (34%)
Similarity:257/546 - (47%) Gaps:131/546 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSSNAGQRTKLIQEKCQTLLTQMLRDEDNKYCVDCDAKGPRWASWNLGMFLCIRCAGIHRNLGV 65
            |::.:..::.:.:.|:.|.:|:::||:||||||.||:||||||||||:|:|:|||||||||||||
Mouse     1 MATRSCREKAQKLNEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIHRNLGV 65

  Fly    66 HISRVKSVNLDTWTPEQVISLQQMGNSRARAVYEAQLPDGFRRPQTDTALENFIRAKYEHKKYLA 130
            |||||||||||.|||||:..:|.|||::||.:|||.||:.|||||||.|:|.|||.|||.|||..
Mouse    66 HISRVKSVNLDQWTPEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAVEFFIRDKYEKKKYYD 130

  Fly   131 REWV----------PPSP----PKVDWAKEIDE-ELERQKRKKKSTQAQATLGLAGVAGGSGDKR 180
            :..:          |..|    |.:..|  :|: :||::|.|||.                 :|:
Mouse   131 KNAIAITNISSSDAPLQPLVSSPSLQAA--VDKNKLEKEKEKKKD-----------------EKK 176

  Fly   181 LSGSSASALKNTPLPA-PLPKPKPNQVGGCSPKTTQRVQLNSSGVSSAGES--DLLGLSSPTK-- 240
            .........|  ||.. .|||.:..|:   .||       .|:...:|.|.  |||||..|.:  
Mouse   177 REKEPEKPAK--PLTTEKLPKKEEQQL---EPK-------KSTSPKNAAEPTIDLLGLDGPAEAP 229

  Fly   241 -----PIVATNASQDLQNESFTSFLSAESIAGQPDKPIGSNGDAANLM------GSKP-----NS 289
                 |..|...|.||            .|.|    |:.||...|.:|      .|.|     ::
Mouse   230 VTNGNPATAPALSDDL------------DIFG----PMISNPLPAAVMPPAQGTASVPAPATLST 278

  Fly   290 LAQEEQDFFNQGSLGAGGNEKDQSGKMSKDSILALYGSAPATHNPQMNFG----GFTGMAPGGYM 350
            :...:.|.|.:.:.   .:|:....::||||||:|||:......|.:..|    .||..||..: 
Mouse   279 VTSGDLDLFTEQTT---KSEEVAKKQLSKDSILSLYGTGAQQSTPGVFMGPTNIPFTSQAPTAF- 339

  Fly   351 HQQQQQQIPHQFMTPPNSVSMYNSPVMAAPNAFSNAAISSATAMSMG--GSHGFTG-AQFPSTGG 412
                 |..|          || ..||.|||....| .:...|.|.:|  ..:||.| ||   ||.
Mouse   340 -----QGFP----------SM-GVPVPAAPGLIGN-MMGQNTGMMVGMPMHNGFMGNAQ---TGV 384

  Fly   413 SPY---AAAGQAAATNLMQTNQSILSGMPLFGAVPQQQQQHQQQLQQQHHPQLGGLSMNLMQPLP 474
            .|.   ....|......|...||.. |:|       |.||.|..|.|.:...   .:|||.....
Mouse   385 MPLPQNVVGPQGGMVGQMGAPQSKF-GLP-------QAQQPQWNLSQMNQQM---AAMNLSSANA 438

  Fly   475 SGLNIGQPPQGAGGF--AATGPTTSS 498
            |. ..||||....|:  :::|.|.|:
Mouse   439 SA-GFGQPPSTTAGWSGSSSGQTLST 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8243NP_610424.1 ArfGap 18..132 CDD:279720 82/113 (73%)
COG5347 20..300 CDD:227651 127/315 (40%)
Smap1NP_001344324.1 ArfGap 20..120 CDD:307528 73/99 (74%)
Med15 <343..>451 CDD:312941 40/134 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 186 1.000 Domainoid score I3347
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 211 1.000 Inparanoid score I3646
Isobase 1 0.950 - 0 Normalized mean entropy S2206
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001773
OrthoInspector 1 1.000 - - otm43030
orthoMCL 1 0.900 - - OOG6_100831
Panther 1 1.100 - - O PTHR45705
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1895
SonicParanoid 1 1.000 - - X1301
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.800

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