DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8243 and smap1

DIOPT Version :9

Sequence 1:NP_610424.1 Gene:CG8243 / 35890 FlyBaseID:FBgn0033349 Length:517 Species:Drosophila melanogaster
Sequence 2:XP_021336343.1 Gene:smap1 / 777731 ZFINID:ZDB-GENE-060920-2 Length:483 Species:Danio rerio


Alignment Length:559 Identity:194/559 - (34%)
Similarity:268/559 - (47%) Gaps:141/559 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSSNAGQRTKLIQEKCQTLLTQMLRDEDNKYCVDCDAKGPRWASWNLGMFLCIRCAGIHRNLGV 65
            |::.:..::.:.:.|:.|.:|::|||::|||||.||:||||||||||||:|:|||||||||||||
Zfish     1 MTTRSEREKAQKLNEQHQAILSKMLREDDNKYCADCEAKGPRWASWNLGVFICIRCAGIHRNLGV 65

  Fly    66 HISRVKSVNLDTWTPEQVISLQQMGNSRARAVYEAQLPDGFRRPQTDTALENFIRAKYEHKKYLA 130
            |||||||||||.|||||:.|:|.|||::||.:|||.||:.|||||||.|:|.|||.|||.|||..
Zfish    66 HISRVKSVNLDQWTPEQIQSVQSMGNTKARQLYEAHLPENFRRPQTDQAVEFFIRDKYERKKYYD 130

  Fly   131 REWV------------PPSPPKVDWAKEIDEELERQKRKKKSTQAQATLGLAGVAGGSGDKRLSG 183
            :..|            ..|.|....|::...|.||:|:|::..:.:.|           ||... 
Zfish   131 KNSVNGAIKSSDAALPSVSSPSSQAAEKSKLEKEREKKKEEKKREKDT-----------DKENK- 183

  Fly   184 SSASALKNTPLPAPLPKPK-PNQVGG-CSPKTTQRVQLNSSGVSSAGESDLLGLSSPTKPIVATN 246
                       ||.|.|.: .||:.. .|||.           |:....|||||.:||....::.
Zfish   184 -----------PAVLEKKREDNQIDSRISPKK-----------SAEPAIDLLGLDAPTVGSASSG 226

  Fly   247 A-------------------SQDLQNESFTSFLSAESIAGQPDKPIGSNGDAANLMGSKPNSLAQ 292
            |                   |..|.:.|.:|.:|:...||.. :...:.|..|...|:...:.||
Zfish   227 AGTSSAAPISDDLDIFGPMVSNPLPSNSNSSQVSSSKAAGSA-QASSAGGAVAGATGTGSAAPAQ 290

  Fly   293 EEQDFFNQGSLGAGGNEKDQSGK--MSKDSILALYGS-------APAT------------HNPQM 336
            .:.|.|::.|   |.::.:.|.|  :||||||:||||       |.||            ..||.
Zfish   291 GDLDLFSETS---GNSKAEDSAKKPLSKDSILSLYGSSTVPQQPAQATAMFMGPSQMQFPAQPQG 352

  Fly   337 NFGGFTGMAPGGYMHQQQQQQIPHQFMTPPNSVSMYNSPVMAAPNAFSNAAISSATAMSMGGS-- 399
            ||..|.||  ||.|              ||.:       :|.|......|.:...|.|.:|.:  
Zfish   353 NFQAFPGM--GGAM--------------PPTT-------MMGAVMGQGGAMMGQNTGMMVGMTMP 394

  Fly   400 HGFTGAQFPSTGGSPYAAAGQAAATNLMQTNQSILSGMPLFGAVP-QQQQQHQQQLQQQHHPQLG 463
            :||.|...|...|   .|.|       |...|.::....::...| ||.|.:..|:.|    |:.
Zfish   395 NGFMGNAQPGVMG---LAPG-------MMGPQGMVPPQNMYAMQPGQQGQWNMAQINQ----QMS 445

  Fly   464 GLSMNLMQPLPSG--LNIGQPPQGAGGFAA--TGPTTSS 498
            |:::|     .||  :..|||....||:.|  :|.|.|:
Zfish   446 GMNLN-----GSGAPMAFGQPGAPMGGWVAPPSGQTLST 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8243NP_610424.1 ArfGap 18..132 CDD:279720 84/113 (74%)
COG5347 20..300 CDD:227651 127/312 (41%)
smap1XP_021336343.1 ArfGap 18..132 CDD:307528 84/113 (74%)
Med15 <329..>466 CDD:312941 44/178 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 189 1.000 Domainoid score I3227
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 235 1.000 Inparanoid score I3372
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1097163at2759
OrthoFinder 1 1.000 - - FOG0001773
OrthoInspector 1 1.000 - - otm24882
orthoMCL 1 0.900 - - OOG6_100831
Panther 1 1.100 - - O PTHR45705
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1895
SonicParanoid 1 1.000 - - X1301
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.860

Return to query results.
Submit another query.