DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8243 and Agap2

DIOPT Version :9

Sequence 1:NP_610424.1 Gene:CG8243 / 35890 FlyBaseID:FBgn0033349 Length:517 Species:Drosophila melanogaster
Sequence 2:XP_038935796.1 Gene:Agap2 / 65218 RGDID:628844 Length:1304 Species:Rattus norvegicus


Alignment Length:132 Identity:56/132 - (42%)
Similarity:78/132 - (59%) Gaps:8/132 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SSNAGQRTKLIQEKCQTLLTQMLRD-EDNKYCVDCDAKGPRWASWNLGMFLCIRCAGIHRNLGVH 66
            ||....||   ..:.:.:..|.:|: :.|..||||.|..|.|||.|||..:||.|:|||||||.|
  Rat   912 SSKVKLRT---DSQSEAVAIQAIRNAKGNSTCVDCGAPNPTWASLNLGALICIECSGIHRNLGTH 973

  Fly    67 ISRVKSVNLDTWTPEQVISLQQMGNSRARAVYEAQLPDGFRRPQTDTA---LENFIRAKYEHKKY 128
            :|||:|::||.|..|..:.|..:||..|..|:|:. ..|..:|..|::   .|::||||||...:
  Rat   974 LSRVRSLDLDDWPRELTLVLTAIGNDTANRVWESD-TRGRAKPTRDSSREERESWIRAKYEQLLF 1037

  Fly   129 LA 130
            ||
  Rat  1038 LA 1039

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8243NP_610424.1 ArfGap 18..132 CDD:279720 52/117 (44%)
COG5347 20..300 CDD:227651 52/115 (45%)
Agap2XP_038935796.1 PRK07764 <37..174 CDD:236090
Centaurin_gamma 401..560 CDD:133303
PH_AGAP 668..908 CDD:241281
ArfGap_AGAP 926..1033 CDD:350065 48/107 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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