DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8243 and Acap2

DIOPT Version :9

Sequence 1:NP_610424.1 Gene:CG8243 / 35890 FlyBaseID:FBgn0033349 Length:517 Species:Drosophila melanogaster
Sequence 2:XP_017453554.1 Gene:Acap2 / 619382 RGDID:1562939 Length:816 Species:Rattus norvegicus


Alignment Length:513 Identity:123/513 - (23%)
Similarity:187/513 - (36%) Gaps:151/513 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SSNAGQRTKLIQEKCQTLLTQMLRDEDNKYCVDCDAKGPRWASWNLGMFLCIRCAGIHRNLGVHI 67
            |.::|..:|....|.::.|.::.....|..|.||....|||||.|||:.|||.|:||||:||||.
  Rat   395 SLDSGSESKEKLLKGESALQRVQCIPGNTSCCDCGLADPRWASINLGITLCIECSGIHRSLGVHF 459

  Fly    68 SRVKSVNLDTWTPEQVISLQQMGNSRARAVYEAQLPD-GFRRPQTDTALEN--FIRAKYEHKKYL 129
            |:|:|:.||||.||.:..:.::||.....||||:|.. |.::||.....|.  :|||||..:|::
  Rat   460 SKVRSLTLDTWEPELLKLMCELGNDVINRVYEAKLEKMGVKKPQPGQRQEKEAYIRAKYVERKFV 524

  Fly   130 AREWVPPSPPKVDWAKEIDEELERQKR-KKKSTQAQATLGLAGVAGGSGDKRLSGSSASALKNTP 193
            .:.....||.            |::|| ..||.:               |:|||.:..|.  :||
  Rat   525 DKYSTLLSPS------------EQEKRIISKSCE---------------DQRLSHTRVSV--HTP 560

  Fly   194 LPAPLPKPKPNQVGGC------------SPKTTQRVQLNSSGVSSAGESDLLGLSSPTKPIVATN 246
            :.|........:...|            :....:.::.|.||:....:.....|.|    .|:.|
  Rat   561 VAAVNSDEARRESLFCPDELDSLFSYFDTSSKLRSIKSNDSGIQQCSDDGRESLPS----TVSAN 621

  Fly   247 ASQDLQNESFTS--FLS----------------------AESIAGQPDKPIGSNGDAANLMGSKP 287
            :..:.:.|...|  ||.                      ||::|         :|...|...|..
  Rat   622 SLYEPEGERQESSVFLDSKHLNPGLQLYRASYEKNLPKMAEALA---------HGADVNWANSDE 677

  Fly   288 NSLAQEEQDFFNQGSL---------GAGGNEKDQSGKMSKDSILALYGSAPATHNPQMNFGGFTG 343
            |......|.... |||         ||..|::|..|:            .|..|...:   |.||
  Rat   678 NQATPLIQAVLG-GSLVTCEFLLQNGANVNQRDVQGR------------GPLHHATVL---GHTG 726

  Fly   344 -----MAPGGYMHQQQQQQIPHQFMTPPNSVSMYNSPVMAAPNAFSNAAISSATAMS-----MGG 398
                 :..|...|...::.               ..|:..|..| :||.|.:...::     |..
  Rat   727 QVCLFLKRGANQHATDEEG---------------KDPLSIAVEA-ANADIVTLLRLARMNEEMRE 775

  Fly   399 SHGFTGAQFPSTGGSPYAAAGQAAATNLMQTNQSILSGMPLFGAVPQQQQQHQQQLQQ 456
            |.|..|.....|....:....|.|:.|                  |::..:.||..|:
  Rat   776 SEGLYGQPGDETYQDIFRDFSQMASNN------------------PEKLNRFQQDSQK 815

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8243NP_610424.1 ArfGap 18..132 CDD:279720 51/116 (44%)
COG5347 20..300 CDD:227651 86/319 (27%)
Acap2XP_017453554.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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