DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8243 and arfgap3

DIOPT Version :10

Sequence 1:NP_610424.1 Gene:CG8243 / 35890 FlyBaseID:FBgn0033349 Length:517 Species:Drosophila melanogaster
Sequence 2:NP_991160.2 Gene:arfgap3 / 402889 ZFINID:ZDB-GENE-040426-1 Length:497 Species:Danio rerio


Alignment Length:376 Identity:86/376 - (22%)
Similarity:142/376 - (37%) Gaps:108/376 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 NKYCVDCDAKGPRWASWNLGMFLCIRCAGIHRNLGVHISRVKSVNLDT-WTPEQVISLQQMGNSR 93
            ||.|.||.||.|.|||...|:||||.|:|.||:||||:|.::|..||: |:..|:..:|..||:.
Zfish    22 NKVCFDCSAKNPSWASITYGVFLCIDCSGTHRSLGVHLSFIRSTELDSNWSWFQLRCMQVGGNAS 86

  Fly    94 ARAVYEAQLPDGFRRPQTDTALENFIRAKYEHK---------KYLARE---------WV----PP 136
            |.|.:.          |...:..:...|||..:         :.||.:         |:    |.
Zfish    87 ANAFFS----------QHGCSSSSAANAKYSSRAAALYRDKIRALANQATRQHGTELWLDAQAPL 141

  Fly   137 SPPKVDWAKEIDEELE-----RQKRKKKSTQAQATLGLAGVAGGSGD-KRLSGSSASALKNTPL- 194
            ||     :..:|::.:     .|.....:.|...:.....|...:.: |..:|.|...|..:|: 
Zfish   142 SP-----SSPLDKQEDFFTQHTQSALPDTVQLNTSQSQRRVQDNNNNAKSEAGPSVEQLSVSPVQ 201

  Fly   195 ----PAPLPKPKPNQVGGCSPKTTQRVQLNSSGVSSAGESDLLGLSSPTKPIVATNASQDLQNES 255
                |..|.|.||..|.                 .|||.....||           .:|.:.::|
Zfish   202 SAAEPLSLLKKKPAAVR-----------------KSAGGGRRAGL-----------GAQKVSSQS 238

  Fly   256 FT---------SFLSAESIAGQPDKPIGSNG---DAANLMGSKPNS---LAQEEQDFFNQGSLGA 305
            ||         ..|:.:..:..||..:.|..   .|.::..|..:|   :.|::::....|..|.
Zfish   239 FTLQQRRAQAEDRLTEQRTSTAPDHSVWSVSRVQQAVDVQHSAQDSSSRMKQQQEERLGMGLSGR 303

  Fly   306 GGNEKDQSGKMSKDSILALYGSAPATHNPQMNFGGFTGMAPGGYMHQQQQQ 356
            .|    .|..:::|....:....|:..:.::            |...:||:
Zfish   304 SG----LSHSVTEDMQTIIQQDCPSLSSRRV------------YEEDEQQE 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8243NP_610424.1 COG5347 20..300 CDD:227651 77/318 (24%)
ArfGap_SMAP 21..123 CDD:350068 37/93 (40%)
arfgap3NP_991160.2 None

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