DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8243 and Appl2

DIOPT Version :9

Sequence 1:NP_610424.1 Gene:CG8243 / 35890 FlyBaseID:FBgn0033349 Length:517 Species:Drosophila melanogaster
Sequence 2:NP_001102211.1 Gene:Appl2 / 362860 RGDID:1563028 Length:662 Species:Rattus norvegicus


Alignment Length:448 Identity:86/448 - (19%)
Similarity:140/448 - (31%) Gaps:141/448 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 EQVISLQQMGNSRARAVYEAQLPDGFRRPQTDTALENFIRAKYEHKKYLAREWVPPSPPKVDWAK 145
            |..::.||:  ||....||.|               ||...|.:.:......:         ::|
  Rat    53 EMCLATQQL--SRQLLAYEKQ---------------NFALGKGDEEVISTLHY---------FSK 91

  Fly   146 EIDE------ELERQK-----------RKKKSTQAQATLGLAGVAGGSGDKRLSGSSASALKNTP 193
            .:||      ||.:|.           |:|..|:......|.|:|....|..::..|.       
  Rat    92 VMDELNGLHSELAKQLADTMVLPVIQFREKDLTEVSTLKDLFGLASNEHDLSMAKYSR------- 149

  Fly   194 LPAPLPKPKPNQVGGCSPKT--------TQRVQLNSS------------GVSSAGESDLLG---- 234
                |||.|.|:    ..||        .:|.|..||            ...:|....|:|    
  Rat   150 ----LPKRKENE----RVKTDVAKEVAAARRKQHLSSLQYYCALNALQYRKRAAMMEPLIGFAHG 206

  Fly   235 -------------------LSSPTKPI----VATNASQDLQNESFTSFLSAESIAGQPDKPIGSN 276
                               |||.|..:    |...|..|....|....||.......||..:.:.
  Rat   207 QINFFKKGAEMFSKSMDGFLSSVTDMVQSIQVELEAEADKMRVSQQELLSVSESVYTPDIDVATP 271

  Fly   277 GDAANLMGSKPNSL-----------AQEEQDFFNQG--------SLGAGGNEKDQSGKMSKDSIL 322
            ....||: .|...|           ..|...||.||        ...|||..:|    :...|::
  Rat   272 QINRNLI-QKTGYLNLRNKTGLVTTTWERLYFFTQGGNLMCQPRGAVAGGLIQD----LDNCSVM 331

  Fly   323 ALYGSAPATHNPQMNFGGFTGMAPGGYMHQQQQQQIPHQFMTPPNSVS----MYNSPVMAAPNAF 383
            |:     ...:.:..|...|.....|.:.|.:.::...:::...|::|    :.::|...|.. .
  Rat   332 AV-----DCEDRRYCFQISTPSGKPGIILQAESRKEYEEWICAINNISRQIYLTDNPEAVAIK-L 390

  Fly   384 SNAAISSATAMSMGG--SHGFTGAQFPSTGGSPYAAAGQAAATNLMQTNQSILSGMPL 439
            :..|:.:.|.::..|  ...|..:|......:.|......||.::.:|.:.|..|.|:
  Rat   391 NQTALQAVTPITSFGKKQESFYFSQNIKNSDTGYVKIVPKAAASIPETEELIAPGTPI 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8243NP_610424.1 ArfGap 18..132 CDD:279720 11/50 (22%)
COG5347 20..300 CDD:227651 58/293 (20%)
Appl2NP_001102211.1 BAR_APPL2 20..234 CDD:153316 43/221 (19%)
BAR-PH_APPL 252..376 CDD:270067 25/133 (19%)
PTB_APPL 480..613 CDD:269980
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 643..662
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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