DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8243 and RhoGAP15B

DIOPT Version :9

Sequence 1:NP_610424.1 Gene:CG8243 / 35890 FlyBaseID:FBgn0033349 Length:517 Species:Drosophila melanogaster
Sequence 2:NP_573183.2 Gene:RhoGAP15B / 32686 FlyBaseID:FBgn0030808 Length:1552 Species:Drosophila melanogaster


Alignment Length:557 Identity:107/557 - (19%)
Similarity:179/557 - (32%) Gaps:190/557 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 PEQ--VISLQQMGNSRARAVYE-AQLPDGFRRPQTDTA-LENFIRAKYEHK---------KYLAR 131
            |||  :.:||.....:.|..|| .:|    |||..|:| ||...||....:         |....
  Fly   458 PEQFRMDALQPPVRQKRRKNYEHIEL----RRPPVDSAQLEELNRAAAAAEREESLLISAKNAEA 518

  Fly   132 EWVPPSPPKVD----WAKEIDEELERQKRKKKST-------QAQATLGL---AGVAGGSGDKRLS 182
            |...|.|.:.|    :.::.:||.:|.:.::.|:       ..:||.|.   ...||.|....|:
  Fly   519 ETKTPKPERSDSWEFYGEDENEEEDRDEEQEGSSSPEPLYANQEATYGKLFEMATAGSSRSNVLT 583

  Fly   183 GSS-------ASALKNTPLPA--------PLPKPKPNQVGGCSPKTTQRVQLNSS---------- 222
            .:.       |...:::.|.|        |||:....:....|.|.:...:.|.|          
  Fly   584 PNQVAEQQQLACITEDSELDACEGAVGGVPLPQAVIEEFDPLSSKCSTLARSNKSNELLLLEHLL 648

  Fly   223 -----GVSSAGESDLLGLSSPTKP--------------IVATNA---SQDLQN------ESFTSF 259
                 |...|.:.|:...:|..:|              ||..||   |..::|      |....:
  Fly   649 EEDTYGTVKAEQDDVSMCTSEEEPTTSAATSPKPQQPQIVHQNARLLSDSMENMLDSDQERAKPY 713

  Fly   260 L-----SAESIAGQPDKPIGSNG-------DAANLMGSKPNS------LAQEEQDFFNQ---GSL 303
            |     ||...:|..|....|..       |.|:.....||:      :..:....:.:   ||.
  Fly   714 LSRMPESANKASGPVDLASASRNRTNWFVPDKASCSDVTPNTSKTTPPIEGDSPPTYLEAIGGSK 778

  Fly   304 GAGGNEKDQS--GKMSKDSILALYGSAPATHNPQMNFGGFTGMAPGGYMHQQQQ------QQIPH 360
            .|.||::::|  |...:.:|.|:       .|.::........|.....:|:|.      |.:|.
  Fly   779 DAAGNQENRSTIGSRFRQTINAI-------SNVKLKMDAMKRKASFRGANQRQSDVRVALQMVPR 836

  Fly   361 QFMTPPNSVSMYNSPVMAAPNAFSNAAISSATAMSMGGSHGFTGAQFPSTGGSPYAAAGQAAATN 425
            ..::|  .:..|..|::..|:......:..                                   
  Fly   837 PSLSP--LLIRYEGPLVRFPSGVVEDILKE----------------------------------- 864

  Fly   426 LMQTNQSILSGMPLFGAVPQQQQQHQQQLQQQHHPQLGGLSMNLMQPLPSGLN------------ 478
             ||..::||           :::|.|..|.|:.......:.::.:..|....|            
  Fly   865 -MQNRKAIL-----------RERQFQTFLDQEMKTPREMIPLDTITTLQCVSNSRVTDTATHFYC 917

  Fly   479 ----IGQPP--QGAGGFAATGPT---TSSVPSNLNQQ 506
                ..||.  .|||...::.|.   |||...|:.||
  Fly   918 FEITTSQPKNGNGAGDAMSSNPNLLMTSSSSGNVKQQ 954

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8243NP_610424.1 ArfGap 18..132 CDD:279720 19/64 (30%)
COG5347 20..300 CDD:227651 66/317 (21%)
RhoGAP15BNP_573183.2 RhoGAP_ARAP 1095..1277 CDD:239850
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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