DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8243 and Agfg2

DIOPT Version :9

Sequence 1:NP_610424.1 Gene:CG8243 / 35890 FlyBaseID:FBgn0033349 Length:517 Species:Drosophila melanogaster
Sequence 2:XP_006249202.1 Gene:Agfg2 / 304375 RGDID:1306590 Length:488 Species:Rattus norvegicus


Alignment Length:549 Identity:128/549 - (23%)
Similarity:194/549 - (35%) Gaps:197/549 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 NKYCVDCDAKGPRWASWNLGMFLCIRCAGIHRNLG-VHISRVKSVNLDTWTPEQVISLQQMGNSR 93
            |::|.:|..:|..:....:|.|:|..|:|:.|.|. .|  ||||:::.|:|..:|:.||..||..
  Rat    44 NRHCFECAQRGVTYVDITVGSFVCTTCSGLLRGLNPPH--RVKSISMTTFTEPEVLFLQSRGNEV 106

  Fly    94 ARAV----YEAQ---LPDGFRRPQTDTALENFIRAKYEHKKYLAREWVPPSPPKVDWAKEIDEEL 151
            .|.:    ::|:   :||. |.||   .::.|::.|||.|::    :|||..             
  Rat   107 CRKIWLGLFDARTSLVPDS-RDPQ---KVKEFLQEKYEKKRW----YVPPEQ------------- 150

  Fly   152 ERQKRKKKSTQAQATLGLAGVAGGSGDKRLSGSSASALKNTPLPAPLPKPKPNQVGGCSPKTTQR 216
                                |.|.|..|    .|.||   ||:...:|:.||.:.          
  Rat   151 --------------------VKGASYSK----GSVSA---TPVQGSVPEGKPIRT---------- 178

  Fly   217 VQLNSSGVSSAGESDLLGLSSPTKPIVATNASQDLQNESFTSFLSAESIAGQPDKPIGSNGDAAN 281
                           |||...|:....|:.:||.:..                     |....|.
  Rat   179 ---------------LLGDPVPSLSDAASTSSQSVSQ---------------------SQARTAQ 207

  Fly   282 LMGSKPNSLAQEEQDFFNQGSLGAGGNEKDQSGKMSKDSILALYGSAPATHNPQM-----NFGGF 341
            ...|:|.|                     ..|.|.:...:||..|..|.. .||:     :|.||
  Rat   208 ARSSQPPS---------------------HSSTKKASTDLLADIGGDPFA-APQVAPAFASFPGF 250

  Fly   342 TGMAP--GGYMHQQQQQQIPHQ--FMTPPNSVSMYNSPVMAAPNAFSNAAISSATAMSMGGSHGF 402
            .|..|  ||:.:.......|..  |.:.|.||   .:|..|.|...:|..::        ||:.|
  Rat   251 GGQNPSHGGFANFDAFSSSPSSSAFGSLPPSV---QTPFQAQPTPAANRMLT--------GSYSF 304

  Fly   403 TGAQFPSTGGSPYAAAGQ----AAATNLMQTNQSILSGMP--LFGAVPQQQQQHQQQLQQQHHPQ 461
            ..:|..:.|.:|.|||.|    |....|::...: ..|:|  :|| :|.|....|..:     |.
  Rat   305 GSSQMSAFGVAPLAAASQPNSLADVGGLLEPRMA-AGGLPGSVFG-MPSQVPALQSAV-----PG 362

  Fly   462 LGGL---------------------SMNLMQP--LPSGLNIG---------QPPQGAGGFAAT-- 492
            :||.                     |.|..||  :.||...|         ||...:|.||:|  
  Rat   363 VGGSTGLPFGAFTNPFTTPAQPQLPSTNPFQPNGIASGPGYGMGSVQPGLLQPAPPSGAFASTFP 427

  Fly   493 ---GPTTSSVPSNLN-QQFGNLNIGNVWQ 517
               .||.:.:....| ..||:|....:.|
  Rat   428 APVFPTQAGLVEQQNGSSFGDLGTSKLGQ 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8243NP_610424.1 ArfGap 18..132 CDD:279720 35/109 (32%)
COG5347 20..300 CDD:227651 62/277 (22%)
Agfg2XP_006249202.1 ArfGap 40..152 CDD:295313 38/150 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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