DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8243 and Smap2

DIOPT Version :9

Sequence 1:NP_610424.1 Gene:CG8243 / 35890 FlyBaseID:FBgn0033349 Length:517 Species:Drosophila melanogaster
Sequence 2:NP_001094139.1 Gene:Smap2 / 298500 RGDID:1308418 Length:428 Species:Rattus norvegicus


Alignment Length:496 Identity:174/496 - (35%)
Similarity:241/496 - (48%) Gaps:106/496 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 EKCQTLLTQMLRDEDNKYCVDCDAKGPRWASWNLGMFLCIRCAGIHRNLGVHISRVKSVNLDTWT 79
            ::.|.:|..:|.:||||:|.||.:|||||||||:|:|:||||||||||||||||||||||||.||
  Rat    10 DRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWT 74

  Fly    80 PEQVISLQQMGNSRARAVYEAQLPDGFRRPQTDTALENFIRAKYEHKKYLAREWVPPSPPKVDWA 144
            .||:..:|:|||.:|..:|||.||:.|||||.|.|:|.|||.|||.|||:.|             
  Rat    75 QEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAVEGFIRDKYEKKKYMDR------------- 126

  Fly   145 KEIDEELERQKRKKKSTQAQATLGLAGVAGGSGDKRLSGSSASALKNTPLPAPLPKPKP---NQV 206
             .:|..:.|:::                    .||...||.         |||..|.:|   .:|
  Rat   127 -SLDINVLRKEK--------------------DDKWKRGSE---------PAPEKKMEPVVFEKV 161

  Fly   207 GGCSPKTTQRVQLNSSGVSSAGESDLLGLSSPTKPIVATNASQDLQNESFTSFLSAESIAGQPDK 271
            .....|...::...||..|:|...|||||.:|....:|.:.:.:...:......|..|.:....|
  Rat   162 KMPQKKEDAQLPRKSSPKSAAPVMDLLGLDAPVACSIANSKTSNALEKDLDLLASVPSPSSVSRK 226

  Fly   272 PIGSNGDAANLMGSKPNSLAQEEQDFFNQGSLGAGGNEKDQSGK--MSKDSILALYGSAPATHNP 334
            .:||...|.: .||.|.:|     :.|.:     .|::.:::||  :||||||:||||    ..|
  Rat   227 AVGSMPTAGS-AGSVPENL-----NLFPE-----PGSKSEETGKKQLSKDSILSLYGS----QTP 276

  Fly   335 QMNFGGFTGMAPGGYMHQQQQQQIPHQFMTPPNSV--SMYNSPV--MAAPNAFSNAAISSATAMS 395
            ||...... |||....:.......|.  :|||||:  ||...||  :|.|     .|....|.|:
  Rat   277 QMPAQAMF-MAPAQMAYPTAYPSFPG--VTPPNSIMGSMMPPPVGMVAHP-----GASGMVTPMA 333

  Fly   396 MGGSHGFTGAQFPSTGGSPYAAAGQAAATNLMQTNQ----SILSGMP--LFGAVPQQQ-QQHQQQ 453
            |..  |:.|....|..|.|         :.:|.|.|    :.::.||  ::|..|.|| |.:..|
  Rat   334 MPA--GYMGGMQASMAGVP---------SGMMTTQQAGYMASMAAMPQTVYGVQPAQQLQWNLTQ 387

  Fly   454 LQQQHHPQLGGLSM---NLMQPLPSGLNIGQPPQGAGGFAA 491
            :.|    |:.|::.   |.|      ::.||...|..|.||
  Rat   388 MTQ----QMAGMNFYGANGM------MSYGQSMGGGNGQAA 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8243NP_610424.1 ArfGap 18..132 CDD:279720 76/113 (67%)
COG5347 20..300 CDD:227651 111/282 (39%)
Smap2NP_001094139.1 ArfGap_SMAP2 16..122 CDD:350083 72/105 (69%)
PBP1 <102..419 CDD:227507 114/404 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166351293
Domainoid 1 1.000 186 1.000 Domainoid score I3265
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H41489
Inparanoid 1 1.050 215 1.000 Inparanoid score I3534
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1097163at2759
OrthoFinder 1 1.000 - - FOG0001773
OrthoInspector 1 1.000 - - otm45094
orthoMCL 1 0.900 - - OOG6_100831
Panther 1 1.100 - - LDO PTHR45705
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1301
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.760

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