DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8243 and Git2

DIOPT Version :9

Sequence 1:NP_610424.1 Gene:CG8243 / 35890 FlyBaseID:FBgn0033349 Length:517 Species:Drosophila melanogaster
Sequence 2:XP_006530402.1 Gene:Git2 / 26431 MGIID:1347053 Length:761 Species:Mus musculus


Alignment Length:633 Identity:129/633 - (20%)
Similarity:212/633 - (33%) Gaps:221/633 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 LTQMLRDEDNKYCVDCDAKGPRWASWNLGMFLCIRCAGIHRNLGVHISRVKSVNLDTWTPEQVIS 85
            :::.||..|  .|.||:...|.|||.|.|.|:|..|..:||:||.|||:|:.:....|.|..:..
Mouse     1 MSKRLRSSD--VCADCNGPDPSWASVNRGTFICDECCSVHRSLGRHISQVRHLKHTAWPPTLLQM 63

  Fly    86 LQQMGNSRARAVYEAQLPD------GFRR--PQTDTALEN---FIRAKYEHKKYLAREWVPPSPP 139
            ::.:.|:.|.:::|..|.|      |.|:  || |....|   ||||||:...::.|  :|....
Mouse    64 VETLYNNGANSIWEHSLLDPASIMSGRRKANPQ-DKVHPNKAEFIRAKYQMLAFVHR--LPCRED 125

  Fly   140 KVDWAKEIDEELERQKR--------KKKSTQAQAT----------LGLAGVAGGSGDKRL----- 181
            ....||::.::|....|        :..|..|||.          |.:|..||......|     
Mouse   126 DSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGSTPLHVASKAGQILQAELLAVYG 190

  Fly   182 --SGSSASALKNTP--------------------------LPAPLPKPKPNQVGG----CSPKTT 214
              .|:..|:.| ||                          |...|...||:...|    ...:..
Mouse   191 ADPGTQDSSGK-TPVDYARQGGHHELAERLIEIQYELTDRLAFYLCGRKPDHKSGQHFLIPQRAD 254

  Fly   215 QRVQLNSSGVSSAGESDLLGLSS------------------------------------------ 237
            :|:.|:.|.::.|.:..|..||:                                          
Mouse   255 RRLSLDLSELAKAAKKKLQSLSNHLFEELAMDVYDEVDRRETDAVWLATQNHSTLVTETTVVPFL 319

  Fly   238 PTKPIVATNASQDLQN------ESFTSF---LSAESIAGQPDKPIGSNGDAANLM---GSKPNSL 290
            |..|..::..:|..|.      ..|.:.   :.:::...|...|:..:.|...|:   .|..:|.
Mouse   320 PVNPEYSSTRNQGRQKLARFNAHEFATLVIDILSDAKRRQQGSPLSRSKDNVELILRTVSTQHST 384

  Fly   291 AQEEQDFFNQGSLGAGGNEKDQSGKMSK-------DSILALYGSAPATHNPQMNFGGFTGMAPGG 348
            ..::.|..:..|: |...:.|...:.||       ||.|:   ..|.|....|.       ....
Mouse   385 ESQDNDQPDYDSV-ASDEDTDVETRASKANRQKSLDSDLS---DGPVTVQEFME-------VKSA 438

  Fly   349 YMHQQQQQQIPHQFMTPPNSVS-----MYN--SPVMAAPNAFSNAAISSATAMSMGGSHGFTGA- 405
            .:..:.::|   |.|...|::|     |..  ..:.:..::....|.:||..:..|..|..|.: 
Mouse   439 LVASEAKRQ---QLMKVNNNLSDELRIMQKKLQTLQSENSSLRRQATASACQVQTGSDHKDTASH 500

  Fly   406 ----QFPSTGGS-------------PYAAAGQAAATNLMQTNQSILSGMPLFGAVPQQQQQHQQQ 453
                :.||..||             ||...|:|:                               
Mouse   501 SSLKRRPSARGSRPMSMYETGSGQKPYLPMGEAS------------------------------- 534

  Fly   454 LQQQHHPQLGGLSMNLMQPLPSGLNIGQPPQGAGGFAATGPTTSSVPS 501
                 ||:   .|...:||.|:.:          |.:|...::||:||
Mouse   535 -----HPE---ESRTRLQPFPTHI----------GRSALVTSSSSLPS 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8243NP_610424.1 ArfGap 18..132 CDD:279720 42/121 (35%)
COG5347 20..300 CDD:227651 86/398 (22%)
Git2XP_006530402.1 ArfGap_GIT2 1..111 CDD:350072 40/112 (36%)
Ank_2 137..229 CDD:372319 16/92 (17%)
ANK repeat 137..165 CDD:293786 6/27 (22%)
ANK repeat 167..197 CDD:293786 6/29 (21%)
GIT_SHD 268..296 CDD:369921 3/27 (11%)
GIT_SHD 332..360 CDD:369921 2/27 (7%)
GIT_CC 416..480 CDD:374629 12/76 (16%)
GIT1_C 640..754 CDD:371961
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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