DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8243 and AGAP3

DIOPT Version :9

Sequence 1:NP_610424.1 Gene:CG8243 / 35890 FlyBaseID:FBgn0033349 Length:517 Species:Drosophila melanogaster
Sequence 2:NP_114152.3 Gene:AGAP3 / 116988 HGNCID:16923 Length:911 Species:Homo sapiens


Alignment Length:205 Identity:71/205 - (34%)
Similarity:104/205 - (50%) Gaps:37/205 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 NAGQRTKLIQEKCQTLLTQMLRD-EDNKYCVDCDAKGPRWASWNLGMFLCIRCAGIHRNLGVHIS 68
            :|..:|:|..:.. .|..|.:|. ..|.:|:||||..|.|||.|||..:||.|:||||:||.|:|
Human   649 SAKDKTRLGNQNA-ALAVQAVRTVRGNSFCIDCDAPNPDWASLNLGALMCIECSGIHRHLGAHLS 712

  Fly    69 RVKSVNLDTWTPEQVISLQQMGNSRARAVYEAQLPDGFRRPQTDTA---LENFIRAKYEHKKYLA 130
            ||:|::||.|.||.:..:..|||:.|.:|:|..| .|:.:|..|..   .|.:||||||.|.:||
Human   713 RVRSLDLDDWPPELLAVMTAMGNALANSVWEGAL-GGYSKPGPDACREEKERWIRAKYEQKLFLA 776

  Fly   131 REWVPPSPPK-VDWAKE-----IDEEL--------ERQKRKKKSTQAQATLGLAGVAGGSGDKRL 181
                 |.|.. |...::     ::::|        ...|.:...|.            |.||.|.
Human   777 -----PLPSSDVPLGQQLLRAVVEDDLRLLVMLLAHGSKEEVNETY------------GDGDGRT 824

  Fly   182 SGSSASALKN 191
            :...:||:.|
Human   825 ALHLSSAMAN 834

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8243NP_610424.1 ArfGap 18..132 CDD:279720 55/117 (47%)
COG5347 20..300 CDD:227651 68/190 (36%)
AGAP3NP_114152.3 small_GTPase 126..291 CDD:197466
Centaurin_gamma 128..285 CDD:133303
PH_AGAP 401..645 CDD:241281
PH 404..>465 CDD:278594
ArfGap 664..778 CDD:279720 54/119 (45%)
Ank_2 789..879 CDD:289560 10/58 (17%)
ANK 789..>878 CDD:238125 10/58 (17%)
ANK repeat 789..819 CDD:293786 3/41 (7%)
ANK repeat 821..852 CDD:293786 5/14 (36%)
ANK repeat 854..879 CDD:293786
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.