DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8243 and agap2

DIOPT Version :9

Sequence 1:NP_610424.1 Gene:CG8243 / 35890 FlyBaseID:FBgn0033349 Length:517 Species:Drosophila melanogaster
Sequence 2:XP_002933734.3 Gene:agap2 / 100496997 XenbaseID:XB-GENE-1011294 Length:2037 Species:Xenopus tropicalis


Alignment Length:150 Identity:58/150 - (38%)
Similarity:87/150 - (57%) Gaps:13/150 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SSSNAGQRTKLIQEKCQTLLTQMLRD-EDNKYCVDCDAKGPRWASWNLGMFLCIRCAGIHRNLGV 65
            ||.|..:    :..:.:.:..|.:|: :.|.:||||.|..|.|||.|||..:||.|:|||||||.
 Frog  1775 SSKNKAR----MDSQSEAVAIQAIRNAKGNSFCVDCGAPNPTWASLNLGALICIECSGIHRNLGT 1835

  Fly    66 HISRVKSVNLDTWTPEQVISLQQMGNSRARAVYEAQLPDGFRRPQTDTA---LENFIRAKYEHKK 127
            |:|||:|::||.|..|..:.|..:||..|.:::| ....|..:|..|::   .|::||||||.:.
 Frog  1836 HLSRVRSLDLDDWPLELTLVLTSIGNEMANSIWE-MTTHGRTKPAPDSSREERESWIRAKYEQRL 1899

  Fly   128 YLAREWVPPSPPKVDWAKEI 147
            :||    |...|.|...|::
 Frog  1900 FLA----PLKSPGVPLVKQL 1915

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG8243NP_610424.1 ArfGap 18..132 CDD:279720 51/117 (44%)
COG5347 20..300 CDD:227651 55/131 (42%)
agap2XP_002933734.3 PHA03247 <111..662 CDD:223021
PHA03247 <470..878 CDD:223021
Centaurin_gamma 1297..1454 CDD:133303
PH_AGAP 1559..1771 CDD:241281
ArfGap_AGAP 1789..1896 CDD:350065 47/107 (44%)