DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8243 and smap2

DIOPT Version :9

Sequence 1:NP_610424.1 Gene:CG8243 / 35890 FlyBaseID:FBgn0033349 Length:517 Species:Drosophila melanogaster
Sequence 2:XP_002938524.3 Gene:smap2 / 100496482 XenbaseID:XB-GENE-5817085 Length:422 Species:Xenopus tropicalis


Alignment Length:538 Identity:175/538 - (32%)
Similarity:222/538 - (41%) Gaps:184/538 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 EKCQTLLTQMLRDEDNKYCVDCDAKGPRWASWNLGMFLCIRCAGIHRNLGVHISRVKSVNLDTWT 79
            |:.|.:|:::|..|:||:|.||.||||||||||:|:|:||||||:|||||||||||||||||.||
 Frog    10 ERYQAVLSELLLREENKFCADCLAKGPRWASWNIGVFVCIRCAGVHRNLGVHISRVKSVNLDQWT 74

  Fly    80 PEQVISLQQMGNSRARAVYEAQLPDGFRRPQTDTALENFIRAKYEHKKYLAREWVPPSPPKVDWA 144
            .||:..:::|||.:|:.:|||.|||.|.|||||.|:|.|||.|||.|||:.|        .||.:
 Frog    75 QEQIQCMEEMGNGKAKRLYEAFLPDNFIRPQTDQAVEVFIREKYEKKKYMDR--------SVDLS 131

  Fly   145 KEIDEELERQKRKKKSTQAQATLGLAGVAGGSGDKRLSGSSASALKNTP-----LPAPLPKPKPN 204
                     ..||:|.|                 |.....||..:|:.|     :..|..|.:..
 Frog   132 ---------AFRKEKDT-----------------KWKKSESAPEIKSGPVIFEKVKLPQKKDETQ 170

  Fly   205 QVGGCSPKTTQRVQLNSSGVSSAGESDLLGLSSPT-------KPIVATNASQDLQNESFTSFLSA 262
            |:....|||.:.|.            |||||..|.       ||..:.....||........:|.
 Frog   171 QLKVSPPKTVEPVM------------DLLGLDVPVANSVPNGKPSTSLEKELDLFGSVAPISISK 223

  Fly   263 ESIAGQPDKPIGSNGDAANLMGSKPNSLAQEEQDFFNQGSLGAGGNEKDQSGKMSKDSILALYGS 327
            .|..|.|    ||:       ||.|.:|     :.|.:.|   |.:|.....::||||||:||||
 Frog   224 SSQPGLP----GSS-------GSVPENL-----NLFPEPS---GKSEDGGKKQLSKDSILSLYGS 269

  Fly   328 APATHNPQMNFGGFTGMAPGGYMHQQQQQQIPHQ----FMTPPNSVSMYNSPVMAAPNAFSNAAI 388
                                      |..|||.|    ||.|..         ||.|||:.    
 Frog   270 --------------------------QAPQIPAQAGAVFMAPAQ---------MAYPNAYP---- 295

  Fly   389 SSATAMSMGGSHGFTGAQFPSTGG-----------------SPYAAAGQAAATNLMQTNQSILSG 436
                        ||...  ||.||                 .|...|..|.....|...|:.:.|
 Frog   296 ------------GFPAV--PSPGGVMGGMMASPVGIMAQPAHPAMVAPMAVPAGYMGGVQAAVMG 346

  Fly   437 MP------------LFGAV--PQQQQQHQQQLQ---QQHHPQLGGLSMNLMQPLPSGLNIGQPPQ 484
            :|            ..|||  |..|.|..||||   .|...|:.|::.                .
 Frog   347 VPNGMMAQHTGYVTNMGAVGQPMYQMQPGQQLQWNVAQMSQQMAGMTF----------------F 395

  Fly   485 GAGGFAATGPTTSSVPSN 502
            |.||.|..|..:.:..||
 Frog   396 GVGGMAGYGQPSCNQGSN 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8243NP_610424.1 ArfGap 18..132 CDD:279720 75/113 (66%)
COG5347 20..300 CDD:227651 114/291 (39%)
smap2XP_002938524.3 ArfGap_SMAP2 16..122 CDD:350083 71/105 (68%)
Med15 270..>411 CDD:312941 44/183 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 186 1.000 Domainoid score I3298
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H41489
Inparanoid 1 1.050 223 1.000 Inparanoid score I3431
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1097163at2759
OrthoFinder 1 1.000 - - FOG0001773
OrthoInspector 1 1.000 - - otm48154
Panther 1 1.100 - - LDO PTHR45705
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1895
SonicParanoid 1 1.000 - - X1301
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.100

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