DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spt and ctnna1

DIOPT Version :10

Sequence 1:NP_610423.3 Gene:Spt / 35889 FlyBaseID:FBgn0033348 Length:591 Species:Drosophila melanogaster
Sequence 2:NP_571531.1 Gene:ctnna1 / 30741 ZFINID:ZDB-GENE-991207-24 Length:907 Species:Danio rerio


Alignment Length:687 Identity:117/687 - (17%)
Similarity:255/687 - (37%) Gaps:176/687 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 EACLLILNRNNAAAANWLNDLCAVLLEFATLAHSSFCSQGQSECSELVCLCLSQIMICIRQV-EN 72
            :.|..:...|...||..|......||..|.:|.                  :.|:::.::.| ||
Zfish   114 DPCSSVKRGNMVRAARALLSAVTHLLVLADMAD------------------VYQLLLQLKLVEEN 160

  Fly    73 TMKL-ECGTTVSVSHQY-----FLDRIRWCLKRLMHLYSEESSSEAVAPERSFLK-----LVDGA 126
            .||: ..||...:..||     .:|::.....:......:....:.:|..|..|:     |...:
Zfish   161 LMKVRNAGTEQDLGIQYKALKPEVDKLNMMAAKRQQELKDVHHKDQMAAARGVLQRNVPMLYTAS 225

  Fly   127 LDCL-----------------------------AQFTSHSEENTDTSNC---------PKTPKEV 153
            ..||                             ||.|| ||:::.:...         ....|::
Zfish   226 RACLQHPDVAAYKANRDLIYKQLQHAVSGISNAAQATS-SEDSSFSQTAGGGELAYALNNFDKQI 289

  Fly   154 L--PLS---QKLRANID-----LILGQSLGFANVALSQDKRALSALCQKVIRECNAFQEECKESF 208
            :  |||   ::.|.:::     :|.|.:| .|:.:.::|.|.     ::::.|||:.::..::..
Zfish   290 IVDPLSFSEERFRPSLEERLESIISGAAL-MADSSCTRDDRR-----ERIVAECNSVRQALQDLL 348

  Fly   209 SANYLSTL--KLRAMTMEQAIYQLEDFINDALLRLVFTCFLD-----FEKFSVDKIRALLRNSPD 266
            | .|:...  |.::..:..||.::.....| |.|.:....:|     |.:.:|..:..:......
Zfish   349 S-EYMGNAGRKEKSDALNTAIDRMTKKTRD-LRRQLRKAVMDHVSDSFLETNVPLLVLIEAAKNG 411

  Fly   267 NDDLADEFIADFDVNIDRATQIGIFAISFAPNLKMKTIMRSCLASFESLDTTLIPSLQAHGSDLH 331
            |:....|:...|..:.::..::...|.|.:.|.:...::|...:..|:|...:|.:..|..:..:
Zfish   412 NEKEVKEYAQVFREHANKLIEVANLACSISNNEEGVKLVRMAASQLETLCPQVINAALALAAKPN 476

  Fly   332 SDILEQH---FNEEVAKFKAALQEIIDSRALVGCCLEILTSGISATEKLFDKQRLEDLVQISLLL 393
            |.:.:.:   |.::..|....|.:.:|.          :||             ::|.:.:|   
Zfish   477 SKVAQDNMDLFKDQWEKQVRVLTDAVDD----------ITS-------------IDDFLCVS--- 515

  Fly   394 VEHFQLEVNRKGLS-ETQDRLGEEYYQQFIRVLRECKAILMCASQVE-------PQRILKRFKIL 450
            ..|...:||:..:: :.:|..|.:.....||. |..:.:.:..|:::       .:::|:..|:|
Zfish   516 ENHILEDVNKCVIALQEKDVDGLDRTAGAIRG-RAARVVHVVTSEMDNYMPGVYTEKVLEATKLL 579

  Fly   451 -RTILRKLHGSLGAGKQEEELPIPLAPLLADDTKGVNEDE------THFTGYKTARSGSILYDTE 508
             .|::.:.         .|::...:..|.|::.:.|:|:|      ..:.|.:..|...::..|.
Zfish   580 TETVMPRF---------TEQVEAAVEALSANNGQPVDENEFIDASRLVYDGVRDIRKAVLMIRTP 635

  Fly   509 RRNRVTRRTDNKLPTNTLDIKSDKA--KPHGNVLRRESLRTVMF-----KRQNIA--------ES 558
            .     ...|:...|...|.:|..:  .....::..:|.|.:|.     ::..||        |.
Zfish   636 E-----ELDDSDFETEDFDSRSRTSVQTEDDQLIAGQSARAIMAQLPQEQKAKIAEQVASFQEEK 695

  Fly   559 RKLYTSMS---NQSTDL-----QITDILDQLTGMSNG 587
            .||...:|   :...|:     |:..|:.::|..:.|
Zfish   696 SKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTDFTRG 732

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SptNP_610423.3 Serendipity_A 1..468 CDD:368466 90/537 (17%)
ctnna1NP_571531.1 Vinculin 19..867 CDD:460040 117/687 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 870..895
Blue background indicates that the domain is not in the aligned region.

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