DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spt and ctnna2

DIOPT Version :10

Sequence 1:NP_610423.3 Gene:Spt / 35889 FlyBaseID:FBgn0033348 Length:591 Species:Drosophila melanogaster
Sequence 2:NP_001090774.1 Gene:ctnna2 / 100037860 XenbaseID:XB-GENE-5955201 Length:966 Species:Xenopus tropicalis


Alignment Length:350 Identity:63/350 - (18%)
Similarity:117/350 - (33%) Gaps:102/350 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 ACLLILNRNNA----AAANWLNDLCAVLLEFA-TLAHSSFCSQGQSECSELVCLCLSQIMICIRQ 69
            ||.:..|....    .||..::.||..::..| |||........|............|:.:....
 Frog   447 ACSISNNEEGVKLVRMAATQIDSLCPQVINAALTLAARPQSKVAQDNMDVFKDQWEKQVRVLTEA 511

  Fly    70 VENTMKLECGTTVSVSHQYFLDRIRWCL----------------------KRLMHLYSEESSS-- 110
            |::...::  ..:|||..:.|:.:..|:                      .|::|:.:.|..:  
 Frog   512 VDDITSVD--DFLSVSENHILEDVNKCVIALQEGDVDTLDRTAGAIRGRAARVIHIINAEMENYE 574

  Fly   111 ----------------EAVAPERSFLKLVDGALDCL-AQFTSHSEEN--TDTSNCP--------- 147
                            |.|.|.  |.:.|:.|::.| |......|||  .|.|...         
 Frog   575 AGVYTEKVLDATKLLCETVMPR--FAEQVEFAIEALSANIPQPFEENEFIDASRLVYDGVRDIRK 637

  Fly   148 -----KTPKEVLPLSQKLRANID-------------LILGQSLGFANVALSQDKRALSALCQKVI 194
                 :||:|:...|...:.:.|             ||.|||.......|.|:::|      |:.
 Frog   638 AVLMIRTPEELEDDSDFEQEDYDVRSRTSVQTEDDQLIAGQSARAIMAQLPQEEKA------KIA 696

  Fly   195 RECNAFQEECKESFSANYLSTLKLRAMTMEQAIYQLEDFINDALLRLVFTCFLDFEKFSVDKIRA 259
            .:...|.:|..:                ::..:.:.:|..||.::.....|.:..|.....:.:.
 Frog   697 EQVEIFHQEKSK----------------LDAEVAKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKG 745

  Fly   260 LLRNSPDNDDLADEFIADFDVNIDR 284
            .|:|:.|..:.|.: ||:....:|:
 Frog   746 PLKNTSDVINAAKK-IAEAGSRMDK 769

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SptNP_610423.3 Serendipity_A 1..468 CDD:368466 63/349 (18%)
ctnna2NP_001090774.1 Vinculin 18..927 CDD:460040 63/349 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 924..952
Blue background indicates that the domain is not in the aligned region.

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